Antrostomus carolinensis (chuck-will's-widow): 104517724
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Entry
104517724 CDS
T08541
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104517724 (IGHMBP2)
03012 Translation factors [BR:
acar03012
]
104517724 (IGHMBP2)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104517724 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104517724 (IGHMBP2)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Other ribosome biogenesis factors
104517724 (IGHMBP2)
Translation factors [BR:
acar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104517724 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Helicase_RecD
ResIII
Viral_helicase1
DEAD
nSTAND3
SLFN-g3_helicase
AAA_16
AAA_22
UvrD-helicase
Flavi_DEAD
AAA_25
IstB_IS21
T2SSE
VWA_2
AAA
DnaB_C
DAP3
ABC_tran
Herpes_ori_bp
Zot
PhoH
NTPase_1
AAA_18
cobW
RuvB_N
NPHP3_N
AAA_33
Motif
Other DBs
NCBI-GeneID:
104517724
NCBI-ProteinID:
XP_010164273
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
AWQESVSLKELQRRGVCLLKLQAASQRTGLYGRLLVTFQPRKYDSDAELPYNSFGPGDIV
GLYDSAGQGDPLSTGIVTRVTSKAVTVAFEESRDGMLSLDRESSYRLLKLANDVTYNRLK
KALNALKQYHGGPASDLIDVLFFSSDPSAFSETKPLKLYNTSLDASQREAVSFSLAQREL
AIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAAYKARILRLGHPA
RLLEPIQQHSLDAVLAHGDNAQIVADIRKDIDQAFAKTKKAQDKGERSHFLSEIKALRKE
LKEREETAMAAALTHASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPL
LKAPKCILAGDHKQLPPTVVSHKAAAEGLALSLMERLIERCGEKVVKMLTVQYRMHQAIM
QWASSEMYSGRLTAHPSVAQHLLRDLPGVTSTEETTIPLLLIDTAGCGLFELELEDEQSK
GNTGEVQLAGLHIQALVEAGVKAQDIAVVAPYNLQVDMLREHLCHRYPELEIKSVDGFQG
REKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR
NT seq
1723 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaggaaagcgtctccctgaaggaactgcagcgcagaggcgtctgcctgctaaa
actgcaagctgccagccagagaaccggcctctacggacggctgctcgtgacgttccagcc
tagaaaatatgactcagacgccgagctgccctataacagttttgggcctggggacattgt
gggcctttacgattcagctggccagggggatccgctctccaccggcatcgtaacacgtgt
cacctccaaagcagtgaccgtggcctttgaggaatctcgagatggcatgctgagcttgga
ccgagagagctcgtaccgcctgctgaaattagccaacgacgtcacctacaacaggctgaa
aaaagctttaaatgcactaaagcagtaccacggtggtccagcctctgatctgatcgacgt
cctcttcttctcctctgatccgagtgcgttcagtgaaacaaagcctctaaagctttacaa
tacctcgctggatgcatcgcagagggaggctgtctccttctcactggcccagagggaact
tgccatcgtccatggaccacctggcacagggaagaccacaacactagtcgagatcatctt
gcaagctgtacagcaaggcctgaaagtcctgtgttgtgccccttccaacgttgctgtgga
taacctggtggaaaggctggctgcctacaaagcccgcatcctgcggctcgggcacccggc
tcgcctgctggagcccatccagcagcattccttggacgcagtcttggcccatggtgacaa
tgcccagatagtggcagatatcaggaaggacatcgaccaggcctttgcaaaaaccaaaaa
ggctcaagacaagggtgagcggagccattttctcagtgagattaaggcactgagaaagga
gctaaaggaacgagaagaaactgccatggctgcagccctcacccatgccagcgttgtcct
tgctacaaatacaggtgcttcctctgatggcccactaaagctgcttcctgaaaatcactt
tgatctggtggtgatagatgagtgtgctcaggccctggaagccagctgctggatacctct
gctgaaggctccgaagtgcatcctggccggggatcacaaacagcttccccccaccgtcgt
ctctcacaaggctgctgccgagggcctcgcgctcagcttgatggagcgtctcatcgagag
gtgcggggagaaggtggtgaagatgctgacggtgcagtaccggatgcaccaggccatcat
gcagtgggcttcctcggagatgtacagcggccggctcactgctcacccgtcggtagccca
gcatttgctcagggacctgccgggcgtcacctctacagaagagaccacaattcccttatt
gcttatagacactgctggctgtggcctgtttgagctggaactggaagatgaacagtctaa
ggggaatacaggggaggtgcagctggctggtttgcacatccaagccttggtggaagctgg
tgtgaaggcacaagacatcgctgttgtagccccctacaatctccaggtagacatgctcag
agagcacctttgccacaggtacccagaactagaaattaaatcagttgatggtttccaagg
aagagagaaagaggcagtgatcctgtcatttgtgagatccaacaggaaaggtgaggtggg
ctttcttgcagaagaccggcggataaacgtggcggtgacccgc
DBGET
integrated database retrieval system
