Antrostomus carolinensis (chuck-will's-widow): 104517754
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Entry
104517754 CDS
T08541
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104517754 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104517754 (PATL1)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104517754 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
104517754 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104517754
NCBI-ProteinID:
XP_010164300
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
LSQQPGGLNSSIWDSSAVLRRIRGPLLTQEMPSVSVLDYALPQRPPQAREEERDPSERAL
PRRSSSPVIGSPPVRAVPIGTPPKQAALPNFNQQILCPKPVHIRAPMQQRYPAPYGERMS
PNQLCNVPNSSLLGHPFPHSVSPVLTPLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPS
VNPKLLQGRVGQMMSPASGFRAFFGAPPAPPPSQPQHPPGPGSHLQNLRPQPQMFRPDTT
HLHPQHRRLLHQRQQQNRNQHRSLNGSVGDRGGHRSNHQEQIRKDPYSNLMLQREKDWVS
KIQMMQLQSTDPYLDDYYYQNYFQKLEKLAAAEEVQGDAPKKERTKLITPQVAKLEHTYK
PVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLL
DVEDYERRYLLSLEGERPALMGERKQKICDMYDNLRGKAPGQER
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ctttcccagcagcctggagggttgaattcctccatctgggacagctcagccgtcctgagg
cgaatccgggggccgctcctcactcaggagatgccatcggtgtccgtgctggactatgct
ctgcctcagagacccccacaagctcgagaggaagagcgagacccctcggagcgagcgtta
ccccggcgttcatcctcccctgtcatcgggagcccccctgtccgggctgtccccatcggc
acccctcccaagcaggcagctctgcccaacttcaaccagcagatcctgtgtccaaagcct
gtccacatccgagctcccatgcagcagcgctaccccgctccctacggcgagaggatgtcc
cccaaccagctctgcaacgtcccgaattcttccctcttgggccacccgttccctcacagc
gtctctcctgtcctcacccccctgcagagagcgcagctgcttggaggagcccaggctggt
cgaatgtcccccagccaatttgcccgtgtgtctggcctggttgggagccccctcccctcc
gtcaatcctaaactgctccagggcagagtcgggcagatgatgtctcccgccagtgggttt
cgtgccttttttggggctccccctgctccacctccctcacaaccgcagcacccgccgggc
cctggatcccacctgcagaacctgaggccacaacctcaaatgttccgacctgacaccacc
cacctacacccccagcaccgtcggctcctgcaccaacggcaacaacagaaccgaaaccag
caccggagtcttaacggctcagtaggggatcgagggggtcaccggagcaatcaccaggag
cagattcggaaagatccttactctaatctgatgttgcaacgggaaaaggactgggtgtcc
aagatccagatgatgcagctgcagagcactgatccctacctggatgattattactaccag
aattacttccagaagctggagaaattagcagcagcagaggaagtccagggtgatgctcct
aagaaggaacgcactaaactcatcacacctcaggtggccaagctggagcacacctacaag
ccagtgcagtttgagggctcgctcgggaaactcacggtctccagcgtcaacaacccccgg
aagatgatcgacgcggtggtgacctcccgcagcgaggatgacgagacgaaggagaagcag
gttcgagacaagagacgccagacgcttgtcacgatcgagaagacatacagcctcctcctg
gacgtggaggactacgagagacgctacctcctgagcctggaaggcgagcggccggccctg
atgggagagaggaagcagaagatctgtgatatgtacgacaatctgagggggaaggcacct
gggcaggagaggtga
DBGET
integrated database retrieval system
