Antrostomus carolinensis (chuck-will's-widow): 104517915
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Entry
104517915 CDS
T08541
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104517915 (CHD1)
03036 Chromosome and associated proteins [BR:
acar03036
]
104517915 (CHD1)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104517915 (CHD1)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104517915 (CHD1)
SLIK complex
104517915 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
104517915
NCBI-ProteinID:
XP_010166566
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MSGSGSVSGTGSDSESEEDREKSSCEESESDYEPKSKVKSRKPPSRIKPKSGKKNAGPKK
RQIDSSEDEEEEEEEEDDDYDKRGSRRQATVNVSYKEAEETKTDSDDLLEVCGEDVPLTE
EDEFETIEKFMDSRVGRKGATGASTTIYAVEADGDPNAGFEKSKEPGEIQYLIKWKGWSH
IHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQ
YQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQSK
TTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADE
MGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITS
RNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLY
KTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLH
KELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSG
FLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRV
LIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG
GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAK
KKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEP
QEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEEII
PEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERK
RPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSETDLRR
LGELVHNGCIKALKDTSSGQERAGGRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKS
IPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQK
ILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRTKKNKVIKAA
KIKEEIKSDSSPQASEKSDEDGDEDNKDEIVSVKYPHKKIKAEKENEEKAEPDIGVKKEA
EEKRETKEKENKRDLKREKKQKEDKKELKEKDIKEKRESKVKESTQKEKEVKEEKVNEIK
SENKEKNKKNPLLDTPVHITATSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRP
EKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLH
KLYKHAIKKRQESQQHSDQNISSNVNTHVIRNPDVERLKENTNHDDSSRDSYSSDRHFSQ
YHDHHKDRHQGDAYKKNDSRKRPYSAFSNGKDHRDWDHYKQDGRYYSDSKHRKLDDYRSR
DHRSNLEGSLKDSRAHSDHRSHSDHRIHSDHHSTSEYSHHKSSRDYRYHSDWQMDHRASG
SGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagggtcagtatcaggaactggttctgattctgaatcagaggaagatagg
gagaaaagcagttgtgaagagagtgaatctgactatgagccaaaaagcaaggtcaaaagc
cggaaacctccaagcagaattaagccaaaaagtgggaaaaagaatgcaggaccgaaaaag
aggcaaattgattcatcagaagatgaggaggaagaagaggaggaggaggatgatgattat
gataagagaggatctcgtcgccaggcaacagtcaatgttagttacaaagaagctgaagaa
accaagacagattctgatgatttgctggaagtttgtggagaagatgtcccactaactgaa
gaagatgaatttgaaactatagagaagttcatggatagtcgggttggccgaaaaggagcc
acgggtgcttcaaccaccatctatgcagttgaggcagatggtgacccaaatgctgggttt
gaaaagtcaaaagagccaggagaaatacagtatcttattaagtggaaaggttggtcacac
atccataacacttgggaaactgaggaaacactgaagcaacaaaatgttaaaggaatgaag
aaactggacaactataagaaaaaggatcaggaaacaaaacgatggctgaaaaatgcttct
ccagaagatgtggaatattacaactgccagcaggagcttacagatgatctacataaacaa
tatcagatagtggaaagaataattgcgcattcaaatcagaaatcggcagctggttatcca
gactactattgcaaatggcagggtctgccgtattcggaatgtagctgggaagatggtgct
ctcattgccaaaaagtttcaggcacgcattgatgagtactttagcagaaatcaatccaag
accactccctttaaggattgcaaggttctaaaacagaggccaaggtttgttgccctaaag
aagcaaccatcttacattggaggacatgaaagtttagagttaagggattatcagttaaat
ggattgaactggcttgctcattcatggtgcaaagggaatagctgtattcttgcagatgaa
atgggtctaggtaaaacaatacaaacaatttcttttctgaactacctgtttcatgaacat
caattgtatgggcctttcttgctagttgtgccactttctaccttgacatcttggcaaaga
gagattcaaacttgggctcctcagatgaatgctgtagtttacttaggagatataactagc
agaaacatgattagaactcatgaatggatgcatccacagacaaaacgattaaaatttaac
atacttctaacaacatatgaaattttgctgaaggataagtcattccttggtggtctgaat
tgggcattcataggagtagatgaagctcatcgtttaaaaaatgacgactctcttctgtac
aagactttaatagactttaagtctaaccatcgtcttcttattactggaaccccgctacaa
aactccctcaaagagctttggtctttgttgcacttcatcatgccagaaaagttttcctct
tgggaagattttgaagaggagcatggcaaagggagagagtatggttatgcaagtcttcac
aaagaacttgagccatttctgctgagaagagttaagaaagatgtagaaaagtctttacct
gctaaagttgagcaaattctgaggatggaaatgagtgcattgcagaagcaatattacaag
tggattttaaccaggaattataaagccctcagtaaaggttcaaaaggcagtacctcaggc
tttttgaacataatgatggaactcaagaagtgttgtaaccattgctacctcattaaacca
ccagatgataatgaattctataataaacaggaggccttacagcatctaatacgtagcagt
gggaaactaatccttcttgacaagcttctgattcgtttgcgagaacgtggcaacagagtt
ctgattttctcacagatggtaaggatgctggacatcctagcagaatatctgaagtatcgt
cagtttccctttcagagacttgatggatcgataaaaggggaattgagaaaacaagctctg
gatcattttaatgcagaaggatcagaggacttctgctttttactgtccacccgagctgga
ggattaggtatcaacttggcatctgctgacactgtagttatatttgattctgactggaat
ccacagaatgatctgcaagcacaggctagagcacataggattggacagaagaaacaggtt
aatatttatcgactagtcacaaaaggatcagtagaagaagatattcttgaaagagccaag
aaaaagatggtgttagatcatttagtaattcagagaatggacactacaggaaaaaccgta
ctacatacaggctctactccttcaagctcaacaccttttaataaggaggagttatcagcg
attttgaagtttggtgctgaggaactttttaaagaacctgaaggggaggaacaggagccc
caggaaatggatatagatgaaatcttgaagagggctgaaactcgggaaaatgagccagga
ccattaactgtaggagatgagttgctttcacaattcaaggtggccaacttttccaatatg
gatgaagatgatattgagttggaaccagagagaaattcaaggaactgggaagaaatcatt
ccagaagtccagcgtagaagaatagaagaagaggaaagacaaaaagaactggaagaaata
tacatgctcccaaggatgagaaactgtgcaaaacagatcagctttaatggaagtgaaggg
agacgcagtaggaacagaagatactctggatctgatagtgactccatctcagaaagaaaa
cggccaaaaaagcgtggaagaccacgaactattcctcgagaaaatattaaaggatttagt
gatgcagagatcaggcggtttatcaagagttacaagaaatttggtggccctcttgaaagg
ttagatgctgtagctagagatgctgaactagttgataaatcagagacagatcttagacgt
ttgggagagcttgtacataatggatgcattaaagctttaaaagacacttcatctggacaa
gaaagagcaggaggtagacttgggaaagttaaaggcccaacattccgaatctcaggagtg
caagtgaatgcaaagctagtaatctctcatgaagaagagttggcaccattgcacaaatcc
attccttcagatccagaggaaagaaaaagatatgtcatcccatgccacaccaaagctgct
cattttgatatagattggggtaaggaagatgattccaatctgttaataggcatctatgaa
tatggttatggcagctgggaaatgataaaaatggatcctgatcttagtttgacacagaag
attttgcctgatgatccagataagaaaccccaggcaaagcagttacagacccgtgcagac
tacctcattaaattactgaataaagaccttgcaaggaaggaagcacaaaggcttgctggt
gcaggcaattcaaagaggaggaaaacaagaactaagaagaataaggtgataaaggctgca
aaaataaaagaagaaataaaaagtgattcttcaccacaagcctctgaaaaatctgatgaa
gatggtgatgaggataacaaggatgagattgtttcagtgaaatatccacataaaaaaata
aaagcagaaaaagaaaatgaagaaaaggctgagccagatattggtgtaaagaaggaagct
gaagaaaagagagagacaaaagaaaaggaaaataagagggatttgaaaagggagaaaaaa
caaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaagagagaaagcaaa
gtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggtaaatgaaatcaaa
tctgaaaataaagaaaaaaataaaaaaaatccattattggatactccagttcatattact
gcgactagtgagccagttcctatatcagaagaatctgaagaactggatcagaaaactttt
agtgtgtgcaaggaaagaatgaggcctgtcaaagcagcattgaagcagctagatcgacca
gagaaaggcctttctgaaagagagcagttggaacatactagacagtgtctaatcaaaatt
ggggatcacattactgaatgtttaaaggagtacacaaatcctgaacaaattaaacagtgg
agaaaaaatttgtggattttcgtctctaagtttacagaatttgatgccagaaagctgcac
aaactgtataagcatgcaatcaaaaaacgccaagagtctcagcaacacagtgaccagaat
attagcagcaatgtgaatacacatgtaattagaaatccagatgtggaaagactgaaggag
aatacaaaccatgatgacagtagcagggacagttattcttctgacagacatttctcacaa
taccacgatcatcataaagacaggcatcagggagatgcttacaagaaaaatgactctagg
aaaaggccatattcagccttcagcaatggaaaagatcacagagactgggatcactacaaa
caagacggcagatactacagtgatagtaaacatagaaagttagatgactacaggagcaga
gaccacaggtcaaacctggaaggaagtttaaaagacagccgggctcattcagatcaccgt
tcccattcagaccacaggatacattcagatcaccattccacttcagagtacagccatcat
aaatcttctagagattataggtaccattcagactggcaaatggaccacagagcttcaggt
agtggcccaaggtcaccattagatcagagatctccatatggttcaaggtctcccctagga
cacagatctccatttgaacactcatcagatcacaaaagtacacccgaacatacgtggagt
agccggaaaacataa
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integrated database retrieval system
