Antrostomus carolinensis (chuck-will's-widow): 104517972
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Entry
104517972 CDS
T08541
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104517972 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104517972 (U2SURP)
Spliceosome [BR:
acar03041
]
Complex A
U2 snRNP components
U2 related factors
104517972 (U2SURP)
Complex B
104517972 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
104517972
NCBI-ProteinID:
XP_010175119
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
VRPPDAVHTTGSADTHPLMESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYE
EFLAAFEGSDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNEK
PPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDS
DGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFG
PLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPI
PPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVK
VVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLY
SILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQ
RDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLV
SDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWE
DWAIYPEPFLIKLQNIFLGLVNIMEDKETEEIPDDLDGAPIEEELDGAPLEDVDGIPIDA
APIDDLDGVPIKSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSK
WELFDQHEESEEEEIQNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPESKSSVKYSEMS
EEKRAKLREIEVSMWCFVPPFCTFLVFPPEFSTYKGVIFTEIIIDLLYGGFFSPVCFYKG
MFVYSLA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtcagaccaccagatgcagtacacaccactggatctgcagatacccatcctttaatggaa
agcaaacttaaagcattcagtattggcaaaatgagtgctgccaaaaggactctgagcaag
aaggagcaagaagaattaaaaaagaaggaggatgagaaggctgctgcagaaatttatgaa
gaattccttgctgcctttgaaggaagcgatggtaataaagtgaaaacatttgtaagagga
ggaatcgttaatgcatctaaagaggagcatgaaacggatgaaaaacggggtaaaatctat
aagccttcatcacgattttcagatcaaaaaaatcagccaagccagccatctaatgagaag
cctccatccctcttaatgatagaaaccaaaaagcctcctttgaagaaaggagagaaggaa
aagaaaaagagtaatttggaactttttaaagaagaattaaagcaaatacaagaggagcgt
gatgaaagacataaaacaaaaggtagattgagtcgttttgaaccgcctcaatcggattcc
gatggtcagcgtcgttcaatggatgctccttcaagaagaaacagatcatctggtgtactg
gatgattacgcaccagggtcacatgatgttggagatccaagcacaacaaatttgtatctc
ggaaacattaatcctcaaatgaatgaagagatgttatgtcaagaatttggacgctttggg
ccattagcgagtgttaaaattatgtggccaagaacagacgaagaaagagcaagagaaaga
aattgtggatttgttgcctttatgaacaggagagatgctgaaagagcattaaagaattta
aatggcaagatgattatgtcgtttgaaatgaagctaggttggggcaaagctgtacctata
ccaccacatccgatatacattccaccttctatgatggagcacacccttcctcctcctcca
tcaggactgccttttaatgcccagcctagggagagattgaagaaccctaatgctccgatg
ttaccaccaccaaaaaacaaagaagattttgagaagactctgtcgcaagccatagtcaaa
gtggttatcccaacagaaaggaatttgctcgctttgatacatcgaatgatagagtttgtg
gtacgggaagggcctatgtttgaagccatgatcatgaaccgcgaaatcaacaatccaatg
ttcaggtttttatttgaaaaccagactccagcccatgtatattatagatggaaactctat
tcgattcttcagggagatgccccaaccaagtggaggacagaagatttccgtatgttcaaa
aatggatcattttggagaccgccgccattgaatccatacttgcatgggatgtcagaagag
caagaaacagaagcatttgtggaggaacctaacaagaagggtgcacttaaggaagaacaa
agggacaaattagaggaaatactgcgtggattaacgcctcggaagaatgatattggcgat
gcaatggttttctgtctaaataatgcggaagctgctgaagaaattgtagactgcattaca
gaatcattgtccattctgaagacgcctcttcctaagaagattgcaagattatatctagtg
tcagatgtgttatacaactcttcagctaaagttgccaatgcttcctactatagaaaattt
tttgaaacaaaattatgtcagatattctctgatctcaatgctacttaccgtacaatacaa
ggccatttacagtctgaaaatttcaagcaacgggtaatgacgtgcttccgagcatgggaa
gactgggcgatctatccagagccgtttctgatcaaactacagaatattttcttggggctt
gtaaatatcatggaagataaagaaacggaagaaataccagatgatcttgatggtgctccc
attgaggaagagcttgatggtgctccactagaagatgtggatggaattcctattgatgct
gctcctattgatgatctggatggagtcccaattaaatcgctggatgatgatcttgatgga
gttcctttggatacagctgaagactcaaaaaagaatgagcctatatttaaagttgcccct
tcaaagtgggaagcagtggatgaatcagaactggaagctcaagctgttactacttctaag
tgggagctttttgaccaacatgaagaatctgaggaagaggaaattcaaaatcaagaggaa
gaaagtgaagatgaggaagacactcagagttctaagtcagaagaacaacacatgtattct
aatcctattaaagaagaaatgcctgaatccaagtcatcagtcaaatattcagaaatgagt
gaagaaaagcgtgccaaactccgagagatagaggtcagcatgtggtgttttgtgccaccc
ttctgtacttttctagtcttcccccctgagttctctacatataagggagttatttttact
gaaataattatagatctattatatggtgggttttttagtccagtgtgtttttataaaggt
atgtttgtttacagccttgcctag
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