Antrostomus carolinensis (chuck-will's-widow): 104517978
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Entry
104517978 CDS
T08541
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03018
RNA degradation
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104517978
09123 Folding, sorting and degradation
03018 RNA degradation
104517978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104517978
03041 Spliceosome [BR:
acar03041
]
104517978
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104517978
mRNA degradation factors
5'-3' decay
Lsm complex
104517978
Spliceosome [BR:
acar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104517978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104517978
NCBI-ProteinID:
XP_010167309
LinkDB
All DBs
Position
Unknown
AA seq
62 aa
AA seq
DB search
MKSDKEIVGTLLGFDDFVNMVLEDVTEFEIAPEGRRITKLDQILLNGNNITMLVPGGEGP
EV
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgacaaagaaatcgttggaacccttctagggtttgatgacttcgtcaatatg
gtattagaagatgttacggaatttgagattgcacccgagggcagaagaatcaccaagcta
gaccagattttgctaaatggcaataacataacaatgctggttcctggaggagaaggacct
gaagtatga
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