Antrostomus carolinensis (chuck-will's-widow): 104518008
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Entry
104518008 CDS
T08541
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03440
Homologous recombination
acar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104518008 (BLM)
03460 Fanconi anemia pathway
104518008 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acar03032
]
104518008 (BLM)
03400 DNA repair and recombination proteins [BR:
acar03400
]
104518008 (BLM)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104518008 (BLM)
DNA replication proteins [BR:
acar03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104518008 (BLM)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104518008 (BLM)
Bloom's syndrome complex (BTR)
104518008 (BLM)
FA (Fanconi anemia) pathway
104518008 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BDHCT_assoc
BDHCT
RecQ_Zn_bind
Helicase_C
RQC
HRDC
Motif
Other DBs
NCBI-GeneID:
104518008
NCBI-ProteinID:
XP_028940630
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MDDICKLVDAIPLHELQSLSCAKELLQQRDLRRKLLANSVPLNKSSTNNTFPRNWKACVD
RPGSALCSGLNRSFSSDRNSPKSTNLPSVLSGTVNSSNFSTKKNETFNTLDTSSASKESI
EEITCPKTTALFSPKVNGKEGTSLSPCSELSFDSSWCEGPGLRNRHPPERPVTSTALKDQ
SKAAAGLPAENSLAAHDTDFDLDHFDIDDFDEDWENLVNVSAPETPSEPLYPPVGEGPPA
RSLLSKIMSRAKGSAVVSNPAAPKSSSSMATKNRSDPTVNNPALERFRGMKFSHSEEMMN
IFHRKFGLHYFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLR
SLIIDQVQKLKSLDIAATYLTGDRTDADASKIYMQLSKKDPVIKLLYVTPEKVCASSRLM
SALENLYDRRLLSRFVIDEAHCVSQWGHDFRQDYKRLNMLRRRFRAVPMMALTATANPRV
QKDIQNQLEMLKPQVFTMSFNRHNLKYEVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLS
RHECDTTAAILQKEGLAALAYHAGLTDSDRDLVQKKWINQEGCQVICATIAFGMGIDKPD
VRYVIHASLPKSVEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQ
THFNNLYSMVHYCENVVDCRRIQLLAYFGETNFNPTFCKDHPEVICDNCSRNKDYKSRNV
TDEVKSIIRFVQEHCGQMGRINAKRNTASGRYTLNMMVDIFLGTKSAKIQSGIFGKGAAY
SRHNVERLFRKLVLDKILDEDLYITANDQAVAYVILGEKAQAVLNGSLHVEFHETESASA
IRKQRASVAKMSQREEMVKKCLGELTDTCKMLGKVFDVHYFNIFSTSTLKKIAETLSSDV
EVLLQIDGVTEDKLEKYGAEIIKVMDKYSEWTVPEDAACQSVDTAPGSTGTPESDEETED
VVTTSSYFCNNANQRRKRKRPPNFRESKRKKTGSGGSQQFHPKGGYSNFRRTKRPFSSKA
PASSGYSSASYSVSATQGAAAKLGIMAPPKPKSRHFLQPSYSIL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatctgtaagctggtcgatgccatcccacttcacgagcttcagtctctgtcg
tgtgcgaaggagctcctccagcagagagacctcaggaggaaattgctggctaattctgtc
cctttgaacaaaagtagcacaaacaacacttttcctagaaactggaaggcatgtgtggac
cgtcctggttctgctctgtgctctggcctgaacaggagcttcagttctgacagaaactca
cccaaatccacaaacctcccgtctgtcctttctggaactgtcaattccagcaatttttct
accaaaaaaaatgaaacatttaataccttggatacctcttctgcttccaaggaaagtatt
gaggagatcacctgccccaaaactacagcactgttttctcccaaggtaaatggcaaagag
ggaacttccctcagcccctgttctgagctgtcctttgacagcagctggtgtgagggacca
gggctgaggaaccgtcatccgccggagcgacccgtgacgagcacagctctgaaagatcag
agcaaagctgctgctggccttcctgcagaaaacagcttagctgcacacgacacagacttt
gacctcgatcactttgatatcgatgattttgacgaggactgggagaatttggtgaatgtt
tcggcacctgaaacgccatctgagccgttgtatccgcccgtcggggaagggccacctgca
aggtcgctgctgtcaaagataatgtccagagccaagggatctgctgttgtatcaaaccct
gctgctcccaaatcgagctcctcgatggcaacaaagaaccgttcagatcccacggtcaat
aaccccgcactagaacgtttcaggggtatgaaattttcccattctgaggaaatgatgaat
atatttcacagaaagtttggtttgcactatttccggacgaatcagctggaggccatcaac
gctgctcttctgggtgaagattgtttcatcttaatgcccactggaggtggtaaaagcttg
tgctaccagctcccagcctgcgtctctgctggagtcactattgttatctctccgttgagg
tcgctgataatagatcaagttcagaaactgaagagtttagatattgctgcaacctatctg
actggtgatagaacagatgctgatgcttcaaaaatatatatgcaattgtcaaaaaaagat
cctgtaataaagctcctgtatgttacccctgagaaggtgtgtgcaagcagccgcctgatg
tcagccctggaaaatctctatgacaggagactcctctcacgttttgtcattgatgaggcc
cactgtgtcagccagtggggtcacgattttcgacaagactacaaacgactgaacatgctc
cgcaggaggtttcgcgctgttcctatgatggctcttactgccactgcgaacccccgagtg
cagaaggatattcagaatcagctggagatgctaaaaccacaagtgtttacaatgagcttc
aacaggcacaacttgaaatatgaagtattgcccaagaagccaaagaaggtggcgatggat
tgcttggaatggattaaaaaatatcacccacatgactctggaataatttattgcctttca
cgtcacgaatgcgacacgacggcagctattttgcagaaggaaggtcttgctgcacttgcc
tatcacgctggcctcactgactccgacagggacctcgtacaaaagaagtggattaaccaa
gaagggtgccaggtcatatgtgcaacaattgcctttggaatgggaatcgataagcctgac
gttcgctacgttatccacgcttctcttcctaagtctgtagaaggttactaccaggaatct
ggcagagctggacgagatggtgaaatgtctcactgtctgctcttctacagctacagtgat
gtcaccaggctgaggcggctgatactgatggagaaagatggaaacagtcacacaagacag
acccactttaacaacctgtacagtatggttcactactgtgagaacgtggttgattgccgg
agaattcagcttttggcctactttggggaaactaattttaatcctaccttttgtaaagat
cacccagaagtaatttgtgataactgcagtagaaacaaggattacaaatcaagaaatgta
acggatgaagtgaagagcattatcagatttgtacaagagcattgtggacaaatgggacga
ataaatgcaaagagaaatacagcttctggaagatacacgttgaatatgatggtggacatt
ttcttaggtacaaagagtgcaaagattcagtctggaatctttgggaagggagctgcctac
tcgaggcacaatgtggaaagactgtttaggaagctggtcttggacaagattctggatgaa
gacttgtacatcacagctaacgaccaagcggtggcctatgtaattctaggagagaaagct
caagctgtgctaaatggatcactacacgtggagtttcatgaaacagaaagtgccagtgcc
atcagaaagcaaagggcttccgtggccaaaatgtcgcagcgggaagagatggttaaaaag
tgtcttggggaacttacagacacgtgcaaaatgcttgggaaagtctttgacgtgcattac
ttcaatattttcagtacttcaacgctaaagaaaatagcagaaaccttgtcatccgatgtg
gaggttttactgcagattgatggtgtcacagaagacaaactggaaaaatatggtgcagaa
ataattaaagtgatggataagtactcggaatggaccgtaccagaagatgctgcctgccaa
agtgtggacacagctccgggaagcactggcacaccagagagtgatgaagaaacagaagat
gtagttacaacctcaagctatttttgcaataatgcaaaccaaagaaggaaaaggaaaagg
ccaccaaacttcagggaatcaaagaggaaaaagacaggcagtggtggcagccagcagttt
catcccaaaggcggttacagcaacttcagaaggaccaaaaggccctttagctcaaaggct
ccagcttcgtctggctacagctcagcatcgtacagtgtcagtgccacacaaggagctgct
gcaaagctggggattatggcaccacccaaacccaaatccagacacttccttcagccttca
tattcaatattgtaa
DBGET
integrated database retrieval system
