Antrostomus carolinensis (chuck-will's-widow): 104518177
Help
Entry
104518177 CDS
T08541
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104518177 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104518177 (DDX5)
03009 Ribosome biogenesis [BR:
acar03009
]
104518177 (DDX5)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104518177 (DDX5)
Spliceosome [BR:
acar03041
]
Complex A
U1 snRNP components
U1 related factors
104518177 (DDX5)
Complex B
104518177 (DDX5)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Helicases
104518177 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104518177
NCBI-ProteinID:
XP_010169367
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRTVQEVEQ
YRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1780 nt
NT seq
+upstream
nt +downstream
nt
gtttggagctccccgtttcggaggaagtagaggtggacccctctctgggaagaaatttgg
aaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaatttga
gaagaacttctatcaagaacatcctgatgtagctagacgtactgtgcaagaagttgaaca
gtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccaattataaa
cttctatgaagctaactttcctgcaaatgttatggaagtaattcagaggcagaacttcac
tgaaccaactgctattcaagcacaaggctggcctgttgcattgagtggattggatatggt
tggagtggcacagactggatcagggaaaacactgtcttacttgttgcctgctattgtgca
tataaatcatcagccattcctggagcgaggagatggacctatttgtcttgtgctggcacc
aactcgtgaactggctcaacaagtgcagcaggtagctgctgaatacagcagagcgtgccg
tttgaagtctacatgtatttatggaggtgctccaaagggaccacaaatccgtgacttaga
aagaggtgtggaaatctgcattgcaacacctggaagacttatagacttcttagaagctgg
aaagaccaatctcagaaggtgtacttatcttgttcttgatgaggctgacaggatgcttga
catgggatttgaacctcagattagaaaaattgtggatcagataagacctgacaggcaaac
tctgatgtggagtgccacgtggccaaaggaagtaaggcagctggctgaagactttttgaa
agaatatgtacacatcaacattggtgcattagaactaagtgcaaaccacaacattcttca
gatagtggatgtgtgtcatgatgtagagaaagatgacaagcttattcgtctgatggagga
aataatgagtgagaaggaaaataaaacaattgtttttgtggaaaccaaaagacggtgtga
tgatcttaccaggaaaatgaggagagatgggtggccagcaatgggtattcatggtgataa
aagtcagcaggagcgggactgggttctaaatgaattcaaacatggaaaagcaccaatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatactctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagcgaacctatggtgcact
aggaaagagagactttggagcaaaaactcaaaatggggcttacagtgcccaaagtttcag
taatggaactccttttggaaatggctttgcagctgcaggcatgcaggctggcttcagggc
tggtaaccctgcaggagcttaccagaatggctatgagcagcagtatggaagtaatattgc
aaatatgcacaatggcatgaaccaacagcagtatgcgtatcctgccactggtgctgctcc
tatgataggttacccaatgccgacaagttattctcaataa
DBGET
integrated database retrieval system
