KEGG   Antrostomus carolinensis (chuck-will's-widow): 104518177
Entry
104518177         CDS       T08541                                 
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104518177 (DDX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acar03041]
    104518177 (DDX5)
   03009 Ribosome biogenesis [BR:acar03009]
    104518177 (DDX5)
Enzymes [BR:acar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104518177 (DDX5)
Spliceosome [BR:acar03041]
 Complex A
  U1 snRNP components
   U1 related factors
    104518177 (DDX5)
 Complex B
    104518177 (DDX5)
Ribosome biogenesis [BR:acar03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    104518177 (DDX5)
SSDB
Motif
Pfam: DEAD P68HR Helicase_C ResIII Helicase_C_2 ERCC3_RAD25_C BNIP2
Other DBs
NCBI-GeneID: 104518177
NCBI-ProteinID: XP_010169367
LinkDB
Position
Unknown
AA seq 592 aa
FGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRTVQEVEQ
YRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq 1780 nt   +upstreamnt  +downstreamnt
gtttggagctccccgtttcggaggaagtagaggtggacccctctctgggaagaaatttgg
aaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaatttga
gaagaacttctatcaagaacatcctgatgtagctagacgtactgtgcaagaagttgaaca
gtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccaattataaa
cttctatgaagctaactttcctgcaaatgttatggaagtaattcagaggcagaacttcac
tgaaccaactgctattcaagcacaaggctggcctgttgcattgagtggattggatatggt
tggagtggcacagactggatcagggaaaacactgtcttacttgttgcctgctattgtgca
tataaatcatcagccattcctggagcgaggagatggacctatttgtcttgtgctggcacc
aactcgtgaactggctcaacaagtgcagcaggtagctgctgaatacagcagagcgtgccg
tttgaagtctacatgtatttatggaggtgctccaaagggaccacaaatccgtgacttaga
aagaggtgtggaaatctgcattgcaacacctggaagacttatagacttcttagaagctgg
aaagaccaatctcagaaggtgtacttatcttgttcttgatgaggctgacaggatgcttga
catgggatttgaacctcagattagaaaaattgtggatcagataagacctgacaggcaaac
tctgatgtggagtgccacgtggccaaaggaagtaaggcagctggctgaagactttttgaa
agaatatgtacacatcaacattggtgcattagaactaagtgcaaaccacaacattcttca
gatagtggatgtgtgtcatgatgtagagaaagatgacaagcttattcgtctgatggagga
aataatgagtgagaaggaaaataaaacaattgtttttgtggaaaccaaaagacggtgtga
tgatcttaccaggaaaatgaggagagatgggtggccagcaatgggtattcatggtgataa
aagtcagcaggagcgggactgggttctaaatgaattcaaacatggaaaagcaccaatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatactctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagcgaacctatggtgcact
aggaaagagagactttggagcaaaaactcaaaatggggcttacagtgcccaaagtttcag
taatggaactccttttggaaatggctttgcagctgcaggcatgcaggctggcttcagggc
tggtaaccctgcaggagcttaccagaatggctatgagcagcagtatggaagtaatattgc
aaatatgcacaatggcatgaaccaacagcagtatgcgtatcctgccactggtgctgctcc
tatgataggttacccaatgccgacaagttattctcaataa

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