Antrostomus carolinensis (chuck-will's-widow): 104518187
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Entry
104518187 CDS
T08541
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104518187 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104518187 (DROSHA)
03009 Ribosome biogenesis [BR:
acar03009
]
104518187 (DROSHA)
03036 Chromosome and associated proteins [BR:
acar03036
]
104518187 (DROSHA)
Enzymes [BR:
acar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
104518187 (DROSHA)
Messenger RNA biogenesis [BR:
acar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104518187 (DROSHA)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
90S particles
RNase
104518187 (DROSHA)
Prokaryotic type
rRNA processing factors
104518187 (DROSHA)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
104518187 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
YcaO
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
104518187
NCBI-ProteinID:
XP_010163035
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCARGQGGPGARTSTQTYRPQNLRQLHPQQPSIQYQYDQQTTPPTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPINQCPMRPPFPNHQIRQSFPVPPCFPPAPPPVPNPSN
APVPGTPAGQSTFPYMMPPPTVPHPPPPPVMPQQVNYQPVYSTGYSQQSFPPPNFNSYQH
NSGSFQSTTANSSGGSSHFRHTGQYQGEKSQSDRRSPDRSKHYEEHRHREHGHIHGDRHR
STNHGDRRDRGRSPERRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRSP
SSDRSYKKDYKRAGSRSPSRERKRPRWEEDRERWSENQSSSKEKNYTPIKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLETSSDSECDSEDDSSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSIENDSVCCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEREPDETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtgcccgtggtcaggggggaccaggagcaaggact
tcaacacagacctaccgccctcagaacctacggcagcttcacccacagcagccttccata
caataccagtatgaccagcaaactacccctccaacaacctactcaaaccctccaaccaca
ggttacatgcctcccaggccagactttgtgccctatcctcctccagttcccccatccaca
caaaatcccatcaatcagtgtcccatgaggccaccatttccaaaccaccagataaggcag
agcttcccagtgcctccatgcttccctcctgctcctccgccggtgccaaaccctagcaat
gctcctgtgccaggaactcctgctgggcaaagcacctttccttacatgatgcctcctccc
acggtaccacaccccccaccaccaccagtcatgccacaacaagtcaactaccagcctgtg
tactccaccgggtattcacagcagtcattcccaccacctaacttcaacagctatcagcac
aactcgggctcctttcagagcaccaccgccaacagcagcggcggcagcagccattttcgg
cacacggggcagtaccagggagagaagtcacaaagcgatcgacggtctccagacaggagc
aagcactacgaggagcaccgacatcgtgaacacggtcacatccacggtgacaggcatcgg
tccactaaccatggggatcgtcgagatcgaggccggagtccagagaggaggaggcaggaa
agcagtcggcaccggacagattacgacagaggaaggatatcgcctcatcacagaagttac
gaacgtaacagggagcgagagagggagaggcataggcaccgtgacagcaggaggtcacca
tcatcagacagatcctacaaaaaagattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaccccgatgggaggaagacagagaaaggtggtctgagaaccagagctcc
agcaaagagaaaaattacactcctatcaaagacaaagaatcagaggagaatgcatctgag
aaaaatgaagaggaagatgaggaattacttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgagatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaagaccaagctggatgaagatttagag
acctccagtgactcagaatgtgactctgaagatgacagcagctgctctagcagttcagat
tctgaagtttttgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
catgaagaactgtggtacaatgatccaggacagatgaatgacggccctttgtgcaagtgc
agcgctaaagcccgacgaacgggaataagacatggcatttatcctggcgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactgtaccactatcgaattactgtg
tcgcctcccacaaatttcttaacagaccgacctactgttattgagtatgacgaccatgaa
tatatctttgaagggttctcaatgtttgcacacgccccactaacaaatattcctctatgt
aaagtaatcagatttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggtcttgagctgttctcttcatatctgttcaaagatattttggag
ctctatgactggaatcttaaaggtccttcaattgaaaatgattccgtttgctgccccaga
tttcacttcatgccacgatttgtgagatttcttccagatggaggaaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcaataaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatatgcagaagaatgcaag
gggatgatcgttaccagccctggcatgaaacccagctcagtccgtattgatcaactggac
cgtgaacagttcaatcctgatgtaattacttttcccattattgtccactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctatggaagagctatgtg
aagctgcgtcacctcctggccaatagtcccaaagtcaaacaggctgataaacaaaaattg
tcacaaagagaggaagcactgcagaaaattcgtcagaagaacacgatgagacgtgaagtg
accgttgagttgagtagccagggattctggaaaacagggatacgctctgacgtctgccag
cacgcaatgatgcttcctgtcctgacccaccatgtccgctaccatcagtgtctgatgcat
ttggacaaattgataggctacacttttcgagataggtgtttgctgcagcttgccatgact
catccaagccatcacttaaactttggaatgaatccagatcatgccaggaattccttatcc
aactgtggtattcgacagccaaagtatggagatagaaaagttcaccatatgcacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaacgaacgtttagaatttctgggagatgctgtggtggagttc
ttaacgagtgtccacttgtactacctgtttcccactctggaggaagggggattagctaca
taccgcaccgctatcgtgcagaaccaacacctggccatgttggctaagaagctggaacta
gatcggtttatgctttatgctcatggtccagacctttgcagggaatcggatctccgccat
gccatggccaactgctttgaagcccttataggagctgtttatctggaggggagcctagaa
gaagcaaaacagttatttggacgtttactcttcaatgataaggacctgcgggatgtatgg
cttaattatccactgcacccactccaactgcaggagtccaatactgacagacaactcatt
gagacctctccagttcttcagaagcttacagagtttgaggaggcaattggagtcatcttt
acgcatgttcggcttctagcacgtgcattcactctgaggacagtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactccataatgcagctagtagcc
acagagtatttattcatacatttccctgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaataggacacaggctaaggtggcagaagagctgggtatgcaagaa
tttgccatcactaatgacaagacaaaaagacctgtagctcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacatcgataaagacttggaatatgtccac
actttcatgaatgtatgcttttttccacggctaaaggagtttattttaaatcaagattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccagacattcctctttacaagactttgcagacagtgggaccgtctcatgccaggacatac
acagtagctgtttacttcaaaggggaaagaataggatgtggtaaaggcccaagtattcag
caagcggaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaggagttgaaagaaatgaggtgggaa
agagagcatcaagagagagaaccagatgagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
