Antrostomus carolinensis (chuck-will's-widow): 104518547
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Entry
104518547 CDS
T08541
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acar01009
]
104518547 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104518547 (SFPQ)
03041 Spliceosome [BR:
acar03041
]
104518547 (SFPQ)
Protein phosphatases and associated proteins [BR:
acar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104518547 (SFPQ)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104518547 (SFPQ)
Spliceosome [BR:
acar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104518547 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
104518547
NCBI-ProteinID:
XP_010162270
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
GFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGF
IKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGP
VERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDE
DGLPEKLAQKNPMYQKERETPPRFAQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDAK
DKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREE
EMMIRQREMEEQMRRQREENYSRMGYMDPRERDMRMGGATTMNMGDPYASAAQKFPPLGG
GGGIGYEANPGVGQAAMSGSMMGSDMRPERFGQGGAGPVGGQGPRGMGPGTPTGYGRGRE
EYEGPNKKPRF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ggatttaaggcaaacctctctcttctgaggcgacccggggagaagacctatactcagcgt
tgccgcttgtttgtcgggaatttacctgctgatataacagacgaagactttaaaagactg
ttcgccaaatatggggagccaggagaggtttttatcaacaaggggaaaggctttggattc
attaaattggaatccagagctcttgcagaaattgcaaaggcagaactggatgataccccc
atgaggggtcgacagcttcgtgttcggtttgccacacatgctgctgctctttcagtgcgt
aatctttcaccctacgtgtccaacgagttgctggaggaagctttttcccagttcggtcca
gtggaaagagctgttgtgattgtagatgatcgaggtcgatcaacaggaaaaggcattgtt
gaatttgcatcaaagccagctgcaagaaaagcctttgaacggtgtactgagggagtgttt
ttgttgacaaccactcctaggccagttattgtggaaccgttggaacaattggatgatgaa
gacggtcttccagaaaagcttgctcagaagaatccaatgtatcaaaaggaaagagagact
cctccccgttttgctcaacctggcagttttgaatttgaatattcccagaggtggaaatct
ttagatgaaatggaaaaacagcagagagagcaagtggcaaaaaatatgaaagatgccaag
gacaaacttgaaagtgagatggaagatgcttatcacgagcatcaggcaaacctgttgcgt
caagacctcatgcggcgtcaggaggagctgagacgtatggaagaactccacaaccaagaa
atgcagaaacgcaaggaaattcagctcaggcaggaggaggagcgccgcaggcgggaagag
gaaatgatgatacgccagcgagagatggaagaacaaatgagaagacagagggaagagaat
tatagtagaatgggttacatggatccaagggagagagacatgagaatgggtggtgccacc
acaatgaacatgggagatccttatgcttctgcagcccagaaattcccacctcttggaggt
ggtggcggaataggttatgaagctaatccaggagttggccaagcagccatgagtggttct
atgatgggaagtgacatgcgtcctgaacgctttgggcagggaggtgcggggcctgtgggt
ggccagggtcctagaggaatggggcctggaacaccaacaggatatggtagagggagagaa
gaatatgaaggcccaaacaaaaagccccgattttag
DBGET
integrated database retrieval system
