Antrostomus carolinensis (chuck-will's-widow): 104518624
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Entry
104518624 CDS
T08541
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03013
Nucleocytoplasmic transport
acar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104518624 (PNN)
03015 mRNA surveillance pathway
104518624 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104518624 (PNN)
03041 Spliceosome [BR:
acar03041
]
104518624 (PNN)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104518624 (PNN)
Spliceosome [BR:
acar03041
]
Complex C
Other components
EJC/TREX
104518624 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
104518624
NCBI-ProteinID:
XP_010174149
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
QRCCPECVLPSDHWCFFLRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATSKERTRR
DLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATEKQKRRQEIEQKLEVQAEEERK
QVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPG
RMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEQQEVQKEEKKEE
QKKEQEEGKVAQQVEELETGNQHNDVEMEEVGEEKGKTGSGHSDAEKEQEEDEQKHEMEI
KVEETAEVRENDKQQDGQHEEVTVVKEESENIQPVDNDQDVAEMNEADSVEPVENENGKE
VEQETDCDVQPEKVCNVPSPEKEKGTKLEIEAEPEEKQEKAPEAQPEPVAEALSQPQSVP
LPQSPQLSQSTQDTEPQADKDENAVVSVKVVEAQTEQSQTQSVEIKSKTRSRSRGRAGNK
MGKSHSRSSSSSSSSSTSSSTSSGSSSTTGASSSTRSSSTSSSTTSGSTSRDSSSSSSSS
SESRSRSRGRGHNRDRKRRRSTDRKRRDASGVERSHKSSKGGSRDNKSSKDKSSRSDRKR
SISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
caaagatgctgtcctgaatgtgtgcttcctagtgaccactggtgcttcttcctcaggctg
gggggagaacgtcggacaagaagagaatcgcgccaagaaagtgacgcagaagatgatgat
attaaaaagccagcgttgccatcttctgttgttgctacctccaaagagcgaacacgtcga
gaccttatacaagatcaaaatatggatgagaagggaaaacaaaggaatcgacgtatattt
ggcttgttgatgggcacccttcaaaaatttaagcaggagtccacagttgctactgagaag
caaaagagacgacaagaaattgaacaaaaacttgaagtgcaagcagaggaagaaagaaaa
caagtagaaaatgaaaggcgagaattgtttgaagaaagacgtgctaaacagacagagctg
cggttattggagcaaaaggttgagcttgctcagctgcaagaagaatggaatgaacataac
gctaaaataattaaatacataagaacaaagacaaaacctcatttattctacatacctggc
agaatgtgtcctgctacacagaagttgatggaagagtcacagaaaaagatgaatgcactc
tttgaaagcaggcgaaatgaatttgcagagcagattaacaaaatggaggccaggcccaga
agacaatctgtgaaggaaaaagaacagcaggaggtgcagaaagaagaaaagaaggaagaa
cagaagaaggagcaggaagagggtaaggtggctcagcaggtggaagagttggagacaggt
aatcagcacaatgatgtagaaatggaggaggtaggggaggaaaagggaaaaacaggttca
gggcatagtgatgcagagaaagaacaggaagaggatgaacagaaacatgaaatggagatt
aaagtagaagagactgctgaggtgagggagaatgataagcaacaggatggtcagcatgaa
gaggtcacagttgtaaaagaggaaagtgaaaacattcagccagtggataatgatcaggat
gtggctgaaatgaatgaagcagatagtgtagaacctgtagaaaatgaaaatggcaaagaa
gtggaacaggaaacagactgtgatgttcagccagaaaaagtgtgtaatgttccttctccg
gagaaggagaaaggtacaaaactagaaattgaagctgaacctgaagaaaaacaggagaaa
gcacctgaagctcagccagaacctgtggctgaggctctatctcagccacagtctgtgcca
ctgccacagtcacctcagttgtctcagtccactcaggatacagagccccaggcagacaag
gatgaaaatgctgtggtgtctgtaaaggtggttgaggcacagacagagcagagtcagaca
cagagtgtagaaatcaagagtaagactaggagtagaagcaggggtagggcagggaacaaa
atgggtaagagtcatagccgtagcagcagcagtagcagcagcagcagtacttcaagcagt
actagtagtggaagtagttccaccactggtgccagcagcagcactcggagtagttccacc
agcagcagcactacaagtggaagtactagcagggacagtagcagcagtagctctagcagt
agtgaaagtagaagtcgaagccgaggaagagggcataacagagatagaaaacgcagaagg
agcacagacaggaagcgaagggatgcttcaggagtagagagaagtcacaagtcctcaaaa
ggtgggagtagagataacaaaagctcaaaggataaaagttcaagatctgacagaaagagg
tctatatcagaaagtagtcggtcaggcaagagaacttcacggagtgaaagagaccgtaaa
tcagacaggaaagacaaaaggcgttaa
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