Antrostomus carolinensis (chuck-will's-widow): 104518710
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Entry
104518710 CDS
T08541
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104518710 (NRDE2)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104518710 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
Suf
Dsh_C
Motif
Other DBs
NCBI-GeneID:
104518710
NCBI-ProteinID:
XP_010172101
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MTPTGDLCGRRIAAASNEVLRFSNKVTFRQMTLLRADMKPKSIIIQRSQELDWLSNPSFS
AEEALLLHQRTTEVTHLIPEKPPLIRTTSRSELSGDSGTDESLKQSSKKRKKKKKKHHDY
KKTKKKTKGDSSSNESDLDTEHTKDKATRSGRNHEKEAAANLDKKTSNLTSSHFVWLDDV
QACTAETFRIDKKPDPANWAYKSLYRGDIARYKRRGESCLGIDAKKQCITWDSSATKKKQ
LQRRPERYFTKNSVKILNTDGIPVCNKSSPSDPPAFIPVFQMENDDPSDTTEVNPLGIYD
PSTTVWLQGEGCKSTDHEPVNTQQTSQEPRMNINSILMTKVEEHNKKVRENPRDINAWME
FVSFQDELMRAPSPYASKGEQEVRRKSLKLILEKKLAILERAIESNPSNVHLKLARLKLC
AEFWEPPALIKEWQKLIFLHPNNPELWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAV
QDGSMVSHPLLPGTEEAMLAIFIHQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLP
TRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGWITLKPDDDDEEEIDEDQEIKD
KTLPKWHIWLDIEYSREARHWLPWRPDKNKKETEEDCEDPERQVLFDDLGPSLIRLSDPD
LQHQLLYSFLQFLGVPCTSKLFPSNLYIAMDENNIFDSVLSDEKPLSSVDFPLSGFNSIG
HMDTMLRRRHHIGHYKEGEEFIQNVFHVLFLLFSGKEKSNFSICWLQYEISKVVQCLQAK
NKKKLKAQGKKSKKLAKNLLKAPDNRNHLSLWKLYAYLEWLLGNTDEARKVFDTALCAAG
TGGLKSPQLCSLGLLYAQLEVELLESLEGAVTSHAVHILTKLVESGPYVPYSGQVLSVSV
LKARKTYEHALQDYLSKTPVPDQDQLINLVGCYALFQYLTVGIDAAVLVYAQTSEKLEAP
GPQKCENTGENFGIQKFPTALEAVTLLHTNLLRFHMKMSVYPLNPLREALTEALKRYPSN
QSLWRSYIHIQRKSHSASKARRFFDGVTRSTDSLEPWLFAIQAEQMRKKLIENVQRADVG
EIHFTIPETGLTNRIVALFEHAVQSENGTHCPLLWRMYLNFLASIGKKEKSKGLFYKALQ
NCPWAKVLYMDAIEYFPDHLQETLDLMTEKELRVRVPMEELELLLEV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccacaggcgacctctgcggaaggcgcatcgccgccgcttcgaatgaagttctc
aggtttagcaataaagtgactttccgtcagatgactcttctcagagctgatatgaagcca
aagtccatcataatacagagatcacaggaactggactggcttagtaacccaagcttctct
gcagaagaggcgctattactgcatcagcgcactacagaggttacacatctcatccctgaa
aaacctccactaataaggactacttcaagatcagagttgtcaggggacagtggtacagat
gaaagtctaaaacagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcatgactat
aagaagacaaaaaagaaaactaagggggactccagtagcaatgaatcggacctggacacc
gagcacacaaaggacaaagccacaagaagtggcagaaatcacgaaaaggaagcagcagca
aatctagataagaaaacatcaaatcttaccagcagtcactttgtttggcttgatgatgtc
caggcttgcacagcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcc
tacaagtccctgtatcgaggcgacatagccagatacaaaaggagaggagagtcctgtctt
ggtatagatgcaaagaaacagtgtataacttgggacagttctgcaacaaaaaagaagcag
ttacaaaggcgacctgagcgctacttcacaaagaacagtgtgaagatactgaacacagat
gggattcctgtttgcaataaaagttctccatctgacccacctgcttttataccagttttc
caaatggaaaatgatgatccttccgacacaacagaagtaaatcctcttgggatttatgat
ccatcaactacagtgtggctacaaggagaagggtgcaagagtacagaccatgagcctgta
aatacacagcaaacaagtcaagagcctaggatgaacattaactccattttaatgacaaaa
gtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaa
tttgtttcttttcaggatgaattaatgagagcacctagcccttatgccagtaagggagaa
caggaagtaagaagaaagtcattgaagttaatcttagaaaagaaactggctattttagag
agggcaattgaaagcaatccgagtaatgttcatctgaaactcgccaggctgaagctctgt
gcagaattctgggagccaccagctttgatcaaggaatggcagaagctgattttcttacat
cccaataatccggagctgtggaagaaatatctcctgttctgtcaaagtcagttcactacc
ttttctgtttcaaaaattaatagtctctacggaaaatgtttgactacattggcagctgta
caggatggcagcatggtatcacatcctctactgcctggcacagaagaagctatgctagct
atatttattcatcagtgccactttctgagacaggctggccattctgagaaagcagtgtct
ttgtttcaggctctgattgacttcaccttctttaaacctgacagcgtaaaagatctgcca
acaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgaattgga
gaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggatc
actctcaagcccgatgatgatgatgaagaggagattgatgaggatcaagaaataaaggat
aaaactctccccaagtggcatatttggttggatattgaatattctcgtgaagcaaggcat
tggttaccttggagaccagacaaaaacaaaaaggaaactgaagaagattgtgaagatcca
gaaagacaggtattatttgatgatcttggaccgtctttgatccggctttctgatccagat
cttcaacatcaactactgtactcatttttgcaatttctgggagttccatgtacaagtaaa
ctctttccttccaacctctatattgccatggatgaaaataatatctttgacagtgtgctt
tctgatgaaaagccactgtcttctgttgattttccactttctggattcaacagtattggt
catatggacacgatgctacgaaggagacaccacataggccactataaagaaggagaagag
ttcatacagaatgtttttcatgttcttttcctgctattttcaggaaaggaaaaatctaac
ttctccatttgttggttacagtacgaaatatccaaggtagttcagtgtctccaagcaaaa
aacaagaagaagctgaaagcacaagggaagaagagtaaaaagttggccaagaatctcctt
aaagcacctgacaaccgaaaccacctttctctctggaaactgtatgcctacctagaatgg
ctgcttggtaacactgacgaggccaggaaggtatttgacacagctctttgcgcagcaggg
acaggaggactgaagagtccccagctctgcagcctcggtctgctttatgctcagctggaa
gtggaactactagaaagtctagaaggagctgttacgtcacatgctgttcatatattgacc
aagctggttgaaagtggaccatatgtgccttacagtggacaagtgttatctgtgagtgtc
ttgaaagctcgtaaaacatacgagcatgcactgcaagattacttaagcaaaacgccggtt
cctgatcaggatcagctgattaacttggttggttgttacgcgctgttccagtatttgact
gttgggattgatgctgcagtgttagtatatgcacagacttcggaaaaacttgaagctcct
ggtccacagaaatgtgaaaatactggagagaattttggcattcaaaaatttcccactgct
cttgaagctgtcacactgctgcatacaaatttactcagattccacatgaaaatgagtgtt
tatcctttgaatccgctgcgagaggcactaacggaggctctgaaacggtatcctagcaac
cagtccctttggaggtcatatatccacatccaaaggaagtctcacagtgccagcaaagca
cgaagattttttgatggtgtcacaaggtctactgactctttagagccctggctgtttgca
atccaagcagagcagatgagaaaaaaactcattgagaatgtgcagagggcagatgttggt
gaaatacatttcactattcctgaaactgggttaacaaatcggatcgtagctctatttgaa
catgcagttcagagtgaaaatggaacccattgtccactgctctggagaatgtatttgaac
tttctggcttcaataggcaaaaaagaaaaaagtaaaggattgttttataaagcccttcaa
aactgtccttgggcaaaggtactgtacatggatgccatagagtacttccctgatcatctg
caagagactcttgatctaatgactgaaaaagaattgagagtgcgggtgcctatggaagag
ctggaactgctattagaggtttaa
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integrated database retrieval system
