KEGG   Antrostomus carolinensis (chuck-will's-widow): 104518947
Entry
104518947         CDS       T08541                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03420  Nucleotide excision repair
acar04115  p53 signaling pathway
acar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104518947 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104518947 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    104518947 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acar04121]
    104518947 (DDB2)
   03400 DNA repair and recombination proteins [BR:acar03400]
    104518947 (DDB2)
Ubiquitin system [BR:acar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104518947 (DDB2)
DNA repair and recombination proteins [BR:acar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104518947 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR3_2nd PEP5_VPS11_N Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 Beta-prop_Vps41 WD40_Gbeta
Other DBs
NCBI-GeneID: 104518947
NCBI-ProteinID: XP_010167928
LinkDB
Position
Unknown
AA seq 515 aa
MAPVNQPKDKKHERAHEQWPEEAKSAGKRKADYKELGSEPQAKRLFVRKTSKPPEKIGWN
GGGSVVRSNRVLFHQLERQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDMKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQTISRAPDCGHEHHNVCCWYCSVDVSASCRAVVTGD
NLGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKTN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLYDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSWELEEMRTKSNNSKSQGRKQKGKDLEK
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggctccagtgaaccagccaaaggacaagaagcatgagagagcacatgagcagtggccg
gaagaggccaaatcagctgggaagaggaaagcggactacaaggaactagggagtgagcca
caagcaaagaggttgtttgtgagaaaaacatccaaaccccctgagaaaatcggttggaac
ggaggtgggtccgtggtgagaagcaacagagtcctgttccatcagctggagcggcagtgc
agcattgttcattacgtctaccagaacatgctgggaggctccattcgggcacagctcagg
cagtgtctgcagctgccctttctgcgttctcttgcctcgtaccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagcactgtc
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatgaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctgagtctgcaggaccttgag
ggcagagcggtgcagacgatctcccgtgccccagactgtggccatgagcaccataatgtt
tgttgctggtactgcagcgttgatgtttctgccagctgccgtgcggtggtgacaggggat
aatctgggaaacgtggtgctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaggaagaaagtgactcatgtagagtttaactcccgatgtgagtggttgttggccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaatatcaaaaacaaaacgaat
tttcttcatgtgcttcctcatgacaaacctgtcaatgcagcttacttcagcccaacagat
ggtgccaagctcctgagcacagaccagcgcagtgaaatcagggtttactcatcttcagac
tggaccaaaccacagcacctgatcccacatcctcatcggcagtttcagcacctcacacct
attaaggcaacgtggcatcctcgctatgacctcattgtagcaggtcgctacccagacccc
aagttcccaggctacacggtgaacgagctacgaactgttgatgtattcgatggaaacact
ggggagatggtttgtcaactttatgatccaaatgcttctggcatcatctcgctcaataaa
tttaaccctatgggagacacgctggcttctggcatgggctttaatattctgatctggagc
cgggaggagatggttgccaagaagcaagaacatcttttgaaagccatgacagaacaaggg
attggaagctggagtttgtccagacgtggaggtcaaaggcaggcaaaccctgggacaagc
aaactcaaagctaacttactgtcttgggagctggaggagatgagaacaaaaagcaacaat
tctaaatcacagggaaggaagcaaaaagggaaggatctggagaagtga

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