Antrostomus carolinensis (chuck-will's-widow): 104519498
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Entry
104519498 CDS
T08541
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104519498 (ZC3H12D)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104519498 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
104519498
NCBI-ProteinID:
XP_010170470
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MPAMMELASSLSSKPVPPCSKVSTAGVEVHQSKLDFFCKLGYGKQDICKVLENLGQEALE
DDVLKELIRMGRKPQALESQTQPSPLKLVARGSCSTSPVSKWLGEDDSDSSNHLRPIVID
GSNVAMSHGNKEIFSCWGIQLAVDWFRERGHKYIKVFVPLWRKEPPRQDSPIADQHILEE
LERQSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFIE
QRLLMYSFVSNRFMPPDDPLGRHGPTLNNFLSKTPVLPEPKWQPCPYGKKCTYGNKCKFY
HPERPHQAQLSVADELRAKIRVQLSLGKEEEKRNCLLYRTGGEPAPPSACTETLRESSSR
AEASCYPGWPRGSSPEQPSSTWATGPGSELGPEQRLLQAEPLRDQPLLEEMSALSISDDT
YSYSRSIHASRDREVTDSPHCCGDLRHNPYSFPHPHSLDHPCFPGCPFQQPVLLPVQGGM
CPGHSWQRSCYIPSGAQHKQGLETQHHVLPQSTALHLDLLHLYSEHQLQQQHCFPSQPPR
QPFLLDSSNGLGFFQKAHAYPDASGSDYWPTPIARPPSAQQAHIYRELCSLFPHSEVNRV
MALYPDIKDIASLTLLIQRHRNL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctatgatggaactagccagttcactttctagcaagccagtaccaccatgctcc
aaagtttctacagcaggagtggaagtgcaccagagcaagctggattttttctgcaagctg
ggctatggtaagcaggacatctgcaaagtgctggagaacttgggccaagaggccctggag
gatgatgtgctgaaagagctgattcggatggggcgcaaacctcaggctctggagagccag
actcaaccttcccctctaaaacttgttgcccgtggatcatgtagcacttccccagtgtca
aagtggcttggagaagatgacagtgattcttccaatcacttgagacccattgtgatcgat
ggcagcaatgttgcaatgagccatggaaacaaagagatattctcctgctgggggatccaa
ctggcagtggattggtttcgagaaagggggcacaaatacatcaaagtttttgtcccactc
tggagaaaggagcctcctcgacaagacagtcccattgcagatcagcacattcttgaagag
cttgagaggcaatcgatccttgtgtacaccccatcccggaaggtgaaaggcaagagggta
gtttgctatgatgatcgctatatagtgaaagttgcttatgagaaagacggagtcattgtt
tccaatgaccattaccgggatctccagaatgaaaaccctgagtggaaatggtttattgag
cagcgactactcatgtactcttttgtcagtaacaggtttatgcctcctgatgatccatta
ggccggcatggacccactcttaacaatttcctcagcaaaacaccagtgcttcctgaacca
aagtggcagccttgtccctatggtaaaaaatgcacctatggtaataaatgcaaattttac
cacccagagagaccacaccaagctcagctctcagttgctgatgagctcagggccaaaata
agggtccagttaagcctggggaaagaggaggagaagcgtaactgcttgctgtacaggacc
ggaggagagcctgcaccacccagcgcctgcacagaaacgctgcgagagtccagcagccgt
gcagaggcttcctgctacccagggtggccgcgggggagctctcctgagcagccatccagc
acctgggccactggccctggctctgagctggggccagagcagcggttgctgcaggcagag
ccgctgcgagaccagccactcctggaggagatgtcagcgctatccatcagtgatgacacc
tacagctacagtcggtccatacacgcctctcgggacagagaggtgacagacagccctcac
tgctgtggtgacctcaggcacaacccctactcctttcctcacccccacagcttggaccac
ccctgctttccaggatgccctttccagcagccagtgctcctacctgtgcagggtgggatg
tgcccaggccacagctggcagaggagctgctacatccccagtggtgctcagcacaaacag
ggcctggagactcagcaccatgttctgccacagtctacagctcttcacctggacctgctt
cacttgtacagtgagcaccagctgcagcagcagcattgctttcccagccagcccccacgg
cagccctttctcttagactccagcaatgggctgggtttcttccagaaagcccatgcttac
cctgatgcctctggcagtgactactggcccaccccaattgcaaggccaccctctgcccag
caagcacacatatacagggagctgtgctcccttttccctcacagtgaggtgaaccgtgtc
atggctttgtaccctgatatcaaggatattgctagcttgactttactgattcaaagacac
agaaacttataa
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