Antrostomus carolinensis (chuck-will's-widow): 104519738
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Entry
104519738 CDS
T08541
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acar03016
]
104519738 (TRUB1)
Enzymes [BR:
acar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104519738 (TRUB1)
Transfer RNA biogenesis [BR:
acar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104519738 (TRUB1)
Prokaryotic type
104519738 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104519738
NCBI-ProteinID:
XP_010168621
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MLKTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIMQVP
PLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFTLDVECGGGFYVRS
LVSDIGKELSTCATMQELTRTKQGPFTLEEHTLYEDKWTIDEIARSLEHCTSLLPGEPSH
KKLKTEHPGETAVSCEDK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaactatgttggcaggttccaagaagtacactgccattggactcctgggcaaa
gctaccgatacattagatgctacaggaaaagtcactgaagaaaaaccttatgaccagata
acaaaaggagatcttgaaaatgtgctgcaaaaattcacaggggacataatgcaggttcct
ccactctattctgctttgaagaaggatggagaaaggctatcaactctgatgaagagagga
gaagcagtcgaagcaaagcctgctcggccagtaagagtgtacagcctctctctccaacag
ttccagccaccactgttcacactggatgttgaatgtggtggtggcttttatgtcaggagc
ctggtcagtgacattggcaaagaactctctacctgtgccactatgcaagagctgacccga
accaaacaagggccatttacactagaggagcacaccctttatgaagacaaatggacaatt
gatgaaattgcacgatccttagagcattgcacgtctcttctcccaggagagccatctcat
aaaaaattgaagacagagcatcctggtgaaactgctgtgagctgtgaagataagtga
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