Antrostomus carolinensis (chuck-will's-widow): 104519895
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Entry
104519895 CDS
T08541
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104519895 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104519895 (DHX8)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104519895 (DHX8)
Spliceosome [BR:
acar03041
]
Complex C
Other components
Step II factors
104519895 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
PRP38_assoc
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
PhoH
TsaE
RSRP
Transformer
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104519895
NCBI-ProteinID:
XP_010172066
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MRPPPKPSTSREAVVKPKSEKEKLKELFPALCRPDNPNIRNMLDEDDVKVAADALKELEA
LMPSADRQGKQSHSDHRAKKKRKSRSRSRDRKRKHRSRSRSHSRTRDKNRGKSRYRSRSR
SHSPSRDRKDREKYIEKSSERWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccaccaaagccatctacgagcagagaggcagttgtcaaacccaaatcggag
aaggaaaagttgaaggaattgtttccagccctttgccggccagacaatcccaacatcagg
aatatgctcgatgaagatgacgtgaaagtggcagctgatgcacttaaagaactcgaagct
ctgatgcccagtgcagacaggcaaggcaaacaaagtcacagtgaccaccgggcaaagaaa
aagaggaagagccgaagtcgtagcagggacaggaaacggaagcacagatctcgctctagg
tctcattctcggactcgggataagaacaggggaaaatccagataccggtcaaggagcaga
agtcacagtcccagcagagaccgtaaggatcgagagaagtacatcgaaaagagcagtgag
agatggagagacaagcacatagaccggccaccacccgaggagccttccattggagacatt
tacaatggcaaagtcacaagtataatgcagtttgggtgctttgtgcagctggaaggacta
aggaagcgttgggagggcttggtccacatctcggagcttcgaagagaagggcgggttgcc
aatgttgccgatgttgtaagcaaaggacaaagagtaaaagttaaagtgttgtcctttacg
ggatccaaaaccagcctgagcatgaaggatgttgatcaagatactggggaagatttgaac
ccaaaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgagaaaccca
gacagacccagtcacctgtccctggtgaacgccccagaggtggaggatgatagccttgaa
cggaaacgcctcacccggatttcagacccggaaaagtgggaaataaaacagatgattgcc
gctaatgtgctttcaaaggaggagtttcctgacttcgatgaggagactgggattcttcct
aaagttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccaccg
ttccttcgaggtcatactaaacagagcatggatatgagtcccatcaaaatagtaaagaat
ccagatggttccttgtcccaggctgcaatgatgcagagcgctttagctaaagaaagacga
gaacttaaacaagcccagagagaagcagagatggattctattcccatgggactcaacaca
cactgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggt
attgggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaa
gcttcttacggtaagaagacccagctttccatcattgagcagagagagagtctcccaatc
ttcagactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttatt
ggagagacaggatctgggaaaacaacacagattacccaatacctggctgaggcagggtat
acgtcaagaggaaagattggatgtactcagcctcgcagagtggctgcaatgtctgttgcg
aagagagtgtcagaggaatttggttgctgcttgggacaagaggttggctacactattcga
tttgaagactgcactagccctgaaactgttatcaaatacatgacagatggtatgttactg
agggagtgcttgatagatcctgatctgactcagtatgccattatcatgctggatgaagcc
catgagaggaccatacatacagatgtgctttttggactcctgaagaagacagtgcagaaa
cgacaggatatgaagttgatagtgacgtcagcgacactggatgctgtgaaattctctcag
tatttctacgaagcaccaatcttcacaattcctggcaggacatacccagtagaaattctg
tacacaaaagagccagagacggattatttggatgccagtctgattacagtaatgcagatc
catttaacagagccaccaggtgacattttggtgtttctaactgggcaggaagagattgac
actgcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagaatta
attatcttaccagtatattcagctttacccagtgaaatgcaaaccaggatcttcgaccca
gccccaccaggaagcagaaaggttgtcattgccactaacattgctgagacatctttgact
attgatgggatatactatgtagtcgatcccggctttgtgaagcagaaagtttataactcc
aagactggaattgatcagctggttgttacaccaatttcacaggctcaagcaaagcagcga
gcaggaagggctgggagaacaggaccaggaaaatgctataggttatatacagagcgtgct
tatcgagatgaaatgctaaccaccaacgtgcctgaaatacagagaacaaatttggccagt
acagtgctttccctgaaggctatgggcatcaatgatttgctctcctttgactttatggat
gctcccccgatggagactctcatcactgccatggagcagctgtacaccctgggagctctg
gatgatgagggactgctcactcgacttgggcgcaggatggcagaattccccttggagcct
atgttgtgcaagatgttgattatgtctgtacatctgggatgcagtgaggaaatgttgaca
atagtctccatgctgtcagtacagaatgtgttctacaggccaaaggataaacaagcactt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggct
gtgtacaattcttggaagaataataagttttcaaatccctggtgctatgaaaattttatc
caggcccgatccttacgcagagcacaggacatccgcaagcagatgttgggcattatggac
aggcataagctggatgtggtatcctgtgggaaggcaacagttcgagtccagaaggccatc
tgtagtggcttcttccgaaatgcagcaaagaaggatccccaggaaggttatcggacactc
attgatcaacaagtagtctacatccacccatccagtgctctcttcaacagacagccagaa
tgggttgtttatcatgaactggtgctgaccaccaaggagtacatgcgtgaagtgacgact
attgatcctcggtggctggtggaatttgcaccagctttcttcaaggtttctgatccaacc
aagctgagcaaacagaaaaagcagcagcggctggaacccctgtacaatcgctatgaggag
cccaatgcttggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
