Antrostomus carolinensis (chuck-will's-widow): 104520006
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Entry
104520006 CDS
T08541
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104520006 (DDX21)
03036 Chromosome and associated proteins [BR:
acar03036
]
104520006 (DDX21)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104520006 (DDX21)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Helicases
104520006 (DDX21)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104520006 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104520006
NCBI-ProteinID:
XP_010168437
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MKARAPRGQGSASRAHLRRGRERPVALYQPHDNNETKEKKEKKSKRHEKSRKRKAPTDES
EQSEDDADSPKLKKSRSGVKENGDTRVKSLEKTRLSSLNIKSTHKKNHSNSSETSSGDGD
SDPEQEMTEEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQART
GTGKTFSFAIPLIEKLQGESQDRKRGRSPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQSGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSYGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGTFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEHQLRYVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPQTAIE
YFKDSARLLIEEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSY
AWRRLRELMGDDVDRKVNRMCFLKGKRGVCFDIPAADQKEIEARWEDSKQWRLCVATELP
ELVESQRGGGGDGRSFSGSRNGRRGTSGRNRFRSRGQKRAF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccgtgcgcctcgtgggcagggaagcgcctcccgggcgcacctgcgccgcggc
agggagcgacctgtcgctttgtaccagccccacgacaataacgagaccaaggagaaaaaa
gagaagaaatctaaacgccatgagaaatctcggaagagaaaggctccgacggatgaaagt
gagcagtcggaggatgatgctgactccccgaaactcaagaaatcaaggagtggagttaaa
gaaaacggtgatacgagagtaaaaagcctggagaaaacgagattatcttctttaaacatt
aaatccactcacaaaaaaaatcacagtaattccagtgagacgtcaagtggtgacggtgac
agtgacccagagcaggagatgacagaagaacagaaagagggtgccttctccaatttttct
atttccaaagagactgttcaacttcttcaagctcgaggagtgacatacctgtttcccgtg
caagtgaaaaccttcaacccagtatattctggcaaagatgtaattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagaatca
caggatagaaaaagaggccgttcaccaaaggtacttgttctttgtccaacgagagagctg
gcaaaccaggttgccaaagatttcaaggacatcacaaggaagctaacagtagcttgtttt
tacggaggaactccatataatggacaaattgacctcatgagaagtggcattgacattttg
gttgggacacctggtcgaatcaaagaccaccttcagagtggcaagctggaccttaccaaa
gtgaaacatgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaatccccagacacta
ctgttttctgcaacttgcccacactgggtgtacgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttattgggaagagaactcaaaaggctgctacaacagtagaa
catttggcaatagaatgtcactggtctcagagagctgcggttattggagatgtcattcag
gtctacagtggcagctatgggaggaccattgtcttttgtgagactaaaaaggaggcaaat
gaactggctctgaatgcttcaatcaaacaggattgccagtcgttgcatggtgacattcct
cagaagcaaagagagatcacactgaaaggttttagaaatggtacatttaaagttctggtt
gccaccaacgtagctgcccgtggtttagatattcctgaagttgacctggttgtacaaagt
tcaccaccaaaggatgtggaatcctatatccatcgttctggacgcacaggtcgagctgga
cgaactgggatctgtatctgtttttatcagcgaaaggaagaacatcagttaagatacgtg
gaacaaaaagcgggcattacattcaagcgagttggtgttcctactgcaacagatataatc
aaggcttccagcaaagatgccatcaggtgtctggattctgttcctcaaactgctattgag
tatttcaaagactctgctcggttgctaatagaagaaaagggaccagttaatgctctggct
gcagctctagcccatatttcaggtgctacctccattgaacagcgttccctgctgaattca
gatgcgggatttgttacaatgatactacgctgctctgaagaaataaacaatatgagctat
gcttggcgaagactgcgagaactgatgggtgacgatgttgacaggaaggtgaacagaatg
tgtttcctcaaggggaaaaggggtgtgtgctttgatattcctgcagcagaccaaaaggaa
atagaggcaagatgggaagactcaaaacaatggcgtttgtgcgtggcaactgaattacct
gagttagtagaatcacagcgagggggaggcggcgatggccgaagcttctcagggtccagg
aatgggcggcgtggtacctctggtagaaacagattcagaagcagaggccaaaaacgagcc
ttttga
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