Antrostomus carolinensis (chuck-will's-widow): 104520123
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Entry
104520123 CDS
T08541
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104520123 (BDP1)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
104520123 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
104520123
NCBI-ProteinID:
XP_028943115
LinkDB
All DBs
Position
Unknown
AA seq
1756 aa
AA seq
DB search
DDKADSSSVAGEASKPAEMPTQRRKRISTMPNLAKPRAGPSSAQRSASKPQRRASQPPDG
SASLQKDSSPSEKSNVESSLKSAMLPEKKTPVPQVPQFSPLKKSANKEQTVGVAAQKNDD
TLQKNVPSPLKERPTQERSGTQEEKLPMKLAPVKEKRTCSDHERILKARKLREMLKEELK
KERMLKHRPPIIEGRSPPDRSKMTMRDLIYYLPENNPMKSSLAEEKRTEKNSALSQLKEQ
EEKNTPDHEEEGEEEEAENGEESQDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCV
VEENDPIFERGSTTTYSSFRKSFYTKPWSNKETDMFFLAISMVGTDFSLIGRLFPHRARA
EIKNKFKREEKVNGWRIDKAFREKRPFDFEFFAHLLEKVLADEGKKKQKTVKNQKPKEKK
PSRPRKKPKAKAASTEATNDKDDLQEARISDAEVEADAVTAEKENEESLDISEQAEEQIA
LEPALAKKKRKKRRKDDLEQEVENLPEEMAIPSKIAEEEKSLKKKKKLVCDAYNDGHTTC
REELDSVIEGKQGETSVTEEKRSESYLPVEDVMERENDVNLCSFEDSNDVLVETESAKLR
TVDIRDDISQESKISELPVSKSRSRERQLEETRETKNKDTLDLHRSDEKQSASESDSQSE
IMKTEKTSSRGRLQRPKPNLVRSSGRREAATQEKMEAEISSPDLVNASEKCSEEDSRRNR
NKDTELENTDLDTKSEEPEKTVIAKAIVRGSRQRFKPNITRASVRNEEPEKDAGNDKMSH
PQPKEEIKKNINESNRSDATSEEAAEKDDQVLETVSQSNETAGLQVDSKQSVLKPTPLKR
GRVQRPKPNLGRTVARQKDLKDEKGPEEEKTEGGEEGDVVHHRDENSDPCLKNDVTVHED
TQPCNVMLEGVVSTDSEMNSIHTRQCSQEKSSEAGSYESEKGLSDVLKQLSDFHTGKSGP
QKEEEKTVVSSAQLLRSQFQRPKPNLRMTSSRKEVLGVNDKGVSQKDTNKEESLTQCDSE
CSILPDTDKAGKYEVPQPLESLGKEKSLGSQEVSEGPSHKPPKTFSRSEDDAVRFCLPEI
KQDDTSSTNAGKNTTEEEDKQRPLQPVQLVRSRFQRYKPNLGRAVGKKELQISENERDKK
PEAEQLVLQKDEFANTVISENEAVLCQADVLSKEEQEQQEMPQVPCISENILCEQSSAEK
STSQEDTLGALKPGQFIRNVSLRTRPNLERAYSEKESPLAQELAAPVEEEANKGENLPVA
EESEELLPSKDDMEVLLSVRNLSRNYNLDLNPKSMKLETLCSSKKLPSCHSKGEREESLS
TNAIGIIQDTTERSNDKLSSGEESKQSGTKPLHQAREPHWNSRLNLMKVSRKRDCSEEGE
NREEDNAENRNAEEYLVLEKTGVSTQKSSDIVEAASFSEATRKHKFTDSVEETYCKRIRQ
EDNRLQSPEVSSESESQVEQEDGSWLSTSQEKKLDNLPRRQSRRSAKRIVLPKHVSELRT
AAFASEADCSEKNNQRQEAKLNVTRGKSLKTTHRKKSGKEHRSSKVTLVTLRAAQEEEEE
EADDFEAEDEDECFAPEEVNKAPVFVPIGLRSPKPVPVQIEETIEELEIPVNMPDVQMST
DAESSSHASFQPVVQREEKETTIHENAEVNKGINDGSTEAAMTLLAMGDQMFQLKTSNEE
WTHMLPTQDELDMANSLVMHAYSKQNRNPSQYLLSSDTSTKELVPSEDGSSINVEDQSTG
TRMDVEEYFEKNATDT
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
cgatgacaaggctgatagctcaagtgttgctggagaagctagtaaacctgcagagatgcc
tacacagagaagaaaacggatctccaccatgcccaatcttgccaaacccagagctggacc
ttcatctgctcagcgttctgcatcaaaaccgcagaggcgagcctcacaacctcctgatgg
cagtgcttcgcttcagaaggattcctctccatcagaaaagagtaatgttgaaagctcttt
aaagtctgccatgctgcctgaaaagaaaacgcctgtgccacaagtgccacagttttcacc
actaaaaaaatcagcgaacaaagagcaaactgtaggtgtagctgctcaaaaaaatgacga
taccttgcagaagaatgtaccctccccactcaaggagagaccaacacaggaaagatcagg
aacacaggaagaaaagctgcctatgaaacttgctcctgtaaaagagaaacgaacatgttc
tgaccatgaaaggatcctcaaagctcggaagttaagagaaatgcttaaagaggaactgaa
gaaagagcggatgttgaaacataggcctccaataattgaaggacgttctcctccagatcg
ttctaaaatgactatgagagacttgatatactatctgccagaaaacaatcctatgaagtc
ttcactggcggaagaaaagagaacagaaaaaaattctgcactgagtcaattgaaagaaca
ggaagagaaaaatactcctgatcacgaagaagaaggtgaggaagaagaagcagagaatgg
ggaggagagtcaggacggtccacttctcgttcctcgtgtgaaagtagcagaagatggttc
aattatactggatgaagaaagtttaactgtagaagttctaagaacaaaaggtccatgtgt
tgtagaagaaaatgatcccatctttgagcgtggctctacaactacatattccagcttcag
gaaaagcttttacacaaaaccatggtcaaataaagaaacagacatgttctttttagctat
cagtatggtaggaacagacttctccttaattggacgactgtttcctcatagagccagagc
agaaattaagaacaagttcaaacgtgaggaaaaagttaatggatggaggatagacaaagc
tttcagagaaaagcgtccctttgattttgaattctttgcccatctgcttgagaaggtctt
agcagatgagggaaagaaaaagcaaaagactgttaaaaaccagaagccaaaggaaaagaa
accatcaaggcctcggaagaagccaaaagcaaaagctgccagcacagaagctactaatga
taaagatgatcttcaggaggccagaatttctgatgcagaagtagaagcagatgctgtgac
ggctgagaaagaaaatgaggaatctttggacatttctgaacaggcagaagaacagattgc
attagagccagcattagcaaaaaagaagcgaaagaagaggagaaaagatgatcttgaaca
ggaagtggagaatcttccagaagaaatggctatcccttcaaaaattgctgaagaagagaa
atccttgaagaaaaaaaaaaaactggtatgtgatgcatacaatgatggtcatactacctg
tagagaagaactggatagtgttattgaaggaaagcaaggtgagacttctgttacagagga
aaagagatcagagtcctatttaccagtggaagatgtaatggagagagaaaatgatgtcaa
tttatgcagctttgaagatagcaatgatgttctagtagaaacagaatctgctaaactgag
aactgtagatattagagatgatatatcacaggaaagcaagatttcagagttaccagtttc
aaaaagtagaagcagagaaagacaactggaagaaactagagaaacaaagaacaaagacac
gcttgacttgcatagatcagatgaaaagcagagtgcatcagaaagtgattctcagtctga
aatcatgaaaactgaaaagacatcaagcagaggccgcttgcaaagacctaaaccaaattt
agtgagatcatctggaaggagagaagcagcaacccaagaaaaaatggaggctgaaatttc
ctctccagaccttgtgaatgcaagtgaaaagtgctctgaggaagacagtagaagaaacag
aaacaaagacacagaattagagaatactgatttggatactaaatctgaagaacctgaaaa
aactgtaattgcaaaggcaatagttagaggaagtcgacagagatttaagcctaatattac
aagagcatctgtaaggaatgaagagcctgaaaaagatgcaggaaatgataaaatgtccca
tccacagcctaaggaggaaatcaaaaagaatattaatgaaagtaatagatctgatgctac
cagtgaagaagctgcagaaaaagatgatcaagtcctggaaacagtgtctcagtctaatga
aacagctggtttacaagtagacagcaaacagagtgtgctgaaaccaacacctctaaagag
aggcagagtgcagagaccaaaaccaaatctaggaagaactgtagcaaggcaaaaagacct
gaaagatgaaaaaggtcctgaagaggagaaaactgaaggtggagaagaaggtgatgtggt
gcaccatagggatgaaaacagtgatccatgcctcaaaaatgatgtgacggttcatgaaga
tactcagccatgcaatgtgatgttagaaggggttgtttctacagattctgagatgaactc
aatacatacaaggcagtgttcccaagaaaaatcctcagaagcaggaagctatgaaagtga
aaagggattgtcagatgtcttgaaacagctttcagatttccatacagggaagtctggtcc
tcagaaggaagaggagaaaactgttgtatcatcagctcagctactgaggagtcaattcca
gagaccaaagccaaatttgagaatgacaagtagtagaaaggaagtgctgggtgtaaatga
taagggtgtatcacagaaagataccaacaaggaagaaagtttgacacagtgtgacagtga
atgtagcatccttcctgatacagataaagcgggaaaatatgaagtcccgcaaccattgga
atccttaggaaaggagaagtcacttggctcccaggaggtttctgaggggcctagtcataa
gcccccaaagacattttcaagatcagaggatgatgcagtcaggttttgtctacctgaaat
taaacaagatgacacctcaagtactaatgcaggcaaaaataccactgaagaagaagataa
acaaagacctcttcaacctgttcagttagtgaggagcagattccagaggtacaagccaaa
cttgggaagagctgtaggaaagaaggaattacaaatatcagaaaatgagagagataagaa
gcctgaagcagagcagttggtgttgcagaaagatgagtttgccaatacagtcatcagtga
aaatgaagccgtattgtgtcaagcagatgtgttgagtaaagaggaacaggaacagcaaga
gatgcctcaggtgccttgtatttctgaaaacatattgtgtgaacaaagcagtgctgaaaa
atccacttcacaagaagacacgctaggtgctctgaaaccaggacaattcataaggaatgt
atctctgagaactagaccaaacctagaaagagcatatagtgaaaaagaatctccattggc
acaagaacttgctgctccagttgaggaagaagcaaataaaggagagaatctgcccgtggc
agaagaatctgaggaacttcttccctcaaaagatgacatggaagtactgttgtctgtgcg
gaatttgtccaggaattacaatctagacctaaatccaaaaagtatgaagttggaaacact
gtgttcctctaaaaaattacctagctgccacagcaagggagaacgagaagaaagtctgtc
aacaaatgctataggaatcattcaggataccacagaaaggtccaatgataaattaagttc
tggagaagaaagtaaacagagtggtacaaaacctttgcatcaagcaagggaaccccactg
gaactcaaggctaaacctaatgaaagttagtagaaaaagagattgctctgaagaaggtga
aaacagagaagaggacaatgctgagaatagaaatgcagaagagtatctggtcttagaaaa
aacaggtgtatcaacgcagaagtctagtgacatagtagaagcggcatccttctcggaagc
tacaaggaaacacaaatttacagactctgttgaagaaacatattgtaaaagaatcaggca
ggaggataatagacttcagtctccagaggtatcatcagagagtgagagtcaagtagaaca
agaagatggttcttggctttctacctctcaagaaaaaaaattagacaatctcccaagaag
gcagtccagaaggtcagcgaaacggatagtgctgccaaaacatgtctcggagctaagaac
tgctgcttttgcctctgaggctgattgcagtgagaagaacaatcaaaggcaagaagctaa
actgaatgttactaggggcaaaagtttgaaaactacacatagaaagaaatctgggaagga
gcacagaagttcaaaggtaaccttggtgaccctccgggctgctcaagaggaggaggagga
ggaggcagatgactttgaggctgaggatgaagatgaatgctttgcaccagaggaagtaaa
caaagctccagtgtttgtgcctataggtcttcgatctccaaaacctgttcctgttcagat
agaggaaaccatagaggagctggaaatacctgtgaatatgccagatgtgcagatgtctac
tgatgctgaaagttcctctcatgcatctttccagccagtggtacagagggaggaaaaaga
aacaaccatacatgaaaatgcagaggtgaacaaaggaattaatgatggaagcactgaagc
tgccatgactttacttgcaatgggtgatcaaatgttccagttaaaaacaagcaatgaaga
atggacacacatgttacccactcaagatgagttggacatggccaatagccttgtaatgca
cgcctactccaaacaaaacagaaatcctagtcagtatttactttcttcagatacttctac
caaggaattggttccttctgaggatggaagcagcattaatgtagaggatcaaagcactgg
cacaagaatggatgttgaagaatattttgagaaaaatgctacagataccag
DBGET
integrated database retrieval system
