Antrostomus carolinensis (chuck-will's-widow): 104520195
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Entry
104520195 CDS
T08541
Symbol
TNN
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104520195 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104520195 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104520195 (TNN)
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104520195 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Ig_DSCAM-DSCAML_C
EGF_Teneurin
DUF4998
Pur_ac_phosph_N
EGF_2
Interfer-bind
GH101_dom-5
CRLF2-like_D2
CBM_4_9
Ig_ILCR1
Neur_chan_memb
TSC22
Motif
Other DBs
NCBI-GeneID:
104520195
NCBI-ProteinID:
XP_010164411
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MDFQSWLTFPIGVLLCCALQTSALQRPASHNCTSNGQRISFSHSYKIDLPTSSQIKVEAD
PLQHKDNGEVQLDPGEAEENEEQNIIFRHNIHVRTPKGDCETFTHIKGLLERMEKLEKEV
AELREVCSPRKCCGGSQGVSHCSGHGTFLPETCSCKCAEGWEGHDCSRPTCPSHCSGRGR
CDGGKCSCEEPYFGEDCRQRFCPENCSGNGICDTATGVCQCYEEFIGRTATRNEDCNEKR
CPGDCSGNGFCDTGECYCHDGFFGLDCSQVLAPQNLQLLNSTENSLAVSWDQMIDVDNYL
ISYYPVGYETWLKQVHVPKEQLSYETVGLHPSTTYNVTLCHVKKGIASEPEYLEATTVLS
VLNAIWVTEEMEHSLEVEWENPPTDVDYYKLKFRSLVEMDEKQVTVPKSNNPESRHIVTG
LKPGTEYEITVIPMKDNTEGIPSSVSGRTGVDSPTNVATDRVTEDTATVSWSKVEAPIDR
YMVRYTSADGDTNEIEVGSENDIITLLDLKPGMEYIIHIWAEKGPQQSKKASTRAVIEID
SPTELLAAQVTEDAITVSWNKVQASVDRYRVSYTSANGDTEEREVEEDKNATTLAGLKPD
TEYVIYIWAEKGEQQSKRISTEAVTEIDSPAHLVTDQVTEDTATISWDRVQAVIDRYTVN
YTSVDGDTEEMEMGKNRTTMTLTGLKPGIEYVIYLWAEKGAQQSKRTSTEAVTEMDSPKN
LATDQVTEDLATISWSIIQTPIDRYMVSYTSADGDTKEIEVGKDMTITTLTGLKPGMQYT
IHLWAELRSKQSKRVSVDTLT
NT seq
2404 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagagctggcttaccttcccaataggagtattgctgtgctgtgctcttcag
acatctgcccttcaacgacctgcatctcacaactgcaccagcaatggtcaaagaatatcc
ttcagccactcctacaagattgacctgcccacgtcctcccagatcaaggtggaggcagat
ccattacagcacaaagacaacggtgaggtgcagctagatcctggggaggctgaggaaaat
gaagagcagaatatcatctttaggcacaacatccatgtgcgtacacccaaaggggactgt
gaaactttcacccacattaagggtctgcttgaaaggatggagaagcttgagaaagaagtg
gcagagctgagagaagtttgcagccctcggaagtgctgtgggggaagccaaggtgtctca
cattgcagtggccacgggacattcctccctgagacttgcagctgtaagtgtgccgagggc
tgggagggccatgactgctcccgtcccacctgccctagccactgcagcggccgtgggcgc
tgtgatggtgggaagtgtagctgtgaggagccttactttggtgaggactgcaggcagcgc
ttctgtcctgagaactgcagtggcaacgggatctgtgacacagccacaggggtctgccag
tgctatgaggagttcatcggaaggactgcaacgagaaacgaggactgcaacgagaaacga
tgccctggggactgcagtggcaatgggttctgtgacacgggagagtgctactgccacgat
ggcttctttggccttgactgctcccaagtgctcgctcctcagaacctgcagctgctgaac
tccacagagaactctctggctgtcagctgggatcaaatgattgatgtggataattacctc
attagctattatccagtagggtatgagacatggctgaaacaagtccacgtgcccaaagag
cagctcagctatgagactgtgggtctccaccccagcaccacatataatgtcacactttgt
catgtgaagaaggggattgccagtgagcccgagtatctagaagcaactacagtcctgtct
gtgctcaatgccatctgggtgacagaagagatggagcactccctggaagtggagtgggag
aacccaccaacagatgtggattattataagctgaagttcagatccctggtggagatggat
gagaaacaggtcacggtgcccaaaagcaataaccccgagagcagacacattgtgactggc
ctgaaacctggcacagagtatgagatcactgtcataccgatgaaagacaatacagagggg
ataccatcctcagtgagtggcaggactggagttgatagcccaaccaatgtggcaactgac
cgagtgacagaggacacagccactgtctcatggagtaaagttgaggctcccatagacagg
tacatggtgagatacacctcagctgatggagacaccaatgaaatagaggtggggagtgaa
aatgacatcatcaccttactggatctgaagccaggcatggaatacatcatccacatctgg
gcggagaagggaccccagcagagcaagaaggcaagcaccagagctgtgatagaaattgac
agcccaactgagctgttggctgcccaagtgacagaggatgcaattactgtttcctggaac
aaagtgcaggcttcagtagacagatacagagtgagctacacctcggctaatggggacaca
gaggagagagaggtggaggaagacaagaatgccaccaccttggcaggactgaagccagac
acagagtatgtcatttacatctgggcagaaaagggagagcagcagagcaagaggatcagc
actgaggctgtgacagaaatcgacagcccagctcacctggtgactgaccaagtgacagag
gacacagccaccatctcctgggacagggtccaggctgtcatagataggtacacggtgaac
tacacctctgttgatggtgacacagaggagatggaaatggggaagaacaggactaccatg
actctgacaggactgaagcctggcattgaatatgtcatctacctctgggcagagaaggga
gcccagcagagcaagaggaccagcacagaggcagtgacagaaatggacagcccaaagaat
ctggcaactgaccaagtgacagaggacttggccaccatctcctggagtatcatccaaact
ccgatagacaggtatatggtgagctacacttctgctgatggggacaccaaggaaatagaa
gtggggaaggacatgaccattaccaccctgacaggactgaaaccaggcatgcagtacacc
atccatctctgggcagagctgagaagcaagcagagcaagagagtgagcgttgacacactg
acag
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