Antrostomus carolinensis (chuck-will's-widow): 104520420
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Entry
104520420 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104520420
Enzymes [BR:
acar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104520420
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104520420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
BMT5-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
104520420
NCBI-ProteinID:
XP_028939357
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
PNSXPLILPVVKEQVSLQKEKHAIKAAGQTPRGQSGFSDGNSKWLAPAKAKKIPSKGNNV
ELSSDGEVEEGSWEMEEEDEDGSSEEMVDDYGASSSEEEELLPIEKAALKQKPDRGGLSE
DESEEEEEVEEVIEEASRQKTGQKEEESSDLQLNLDIDEQFKLPTNEQIEREAAEPPDLH
IIHQRIKGNMEVLQDFAVKREEGRTRQEYLALLRRDMAAYYSYSDFLLMKLMDIFPLPEL
INFLEANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGA
TPEYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDS
NAERLRSVVGNLHRLGVTNAVVSNCDGRQFPKVLGGFDRVLLDAPCSGTGIISKDPAVKT
NKDEKDILRCAHLQKELILSAIDSVNAASETGGYIVYCTCSITVEENEWVVDYALKKRNV
RLVATGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKFKKLSNAIPQAQED
EEPAVEAASQSTVPDAVTEPQPKKKKLEGSKADKEQKPPQPALKKRRSLQAQRRPLKAGR
PSTKMMRPQVPTRKKHRVKPNGQ
NT seq
1874 nt
NT seq
+upstream
nt +downstream
nt
tgcctaactcctagccacttattctgcctgtagttaaagagcaggtatccctgcagaagg
agaaacatgccataaaggcagcaggacaaacccctcgtggccagtctggcttcagcgatg
gcaactcaaaatggttggctccggccaaagccaagaaaatcccatctaaaggaaataacg
tggagttatccagcgatggagaggtggaagagggcagctgggagatggaggaggaggatg
aggacggaagcagcgaggagatggtggatgattatggtgcctcatcatcagaggaagaag
agttgctgcctattgaaaaagctgccctgaagcagaagcctgacaggggaggcctcagtg
aagatgagagtgaagaggaggaggaggtggaggaagtgatagaggaggcaagcaggcaga
aaacaggacagaaggaggaagagagctcggatctgcagctcaacctggatatagatgaac
aatttaaactgccaactaatgaacagattgagagagaggctgctgagccacctgacctgc
acatcattcaccagcgcatcaagggcaacatggaggtgctgcaggactttgcggtgaagc
gggaggaaggacgcacgcggcaggagtacctcgcgttgttgcgccgggatatggctgctt
actattcctacagtgacttcttgctcatgaaactcatggacatcttccctcttcctgagc
tgataaacttcctggaagccaatgaggttcctcgccctgtgaccattcgcaccaacacac
tcaagacgcggcgacgggacctggcacaggctctaatcaaccgtggtgtgaatctcgacc
ccctggggaagtggtcaaaaacgggacttgttatttatgattcctctgtgcccatcggtg
ccacccctgagtatctggctgggcactacatgctgcaaggagcctccagtctcctccctg
tcatggctctggctccgcaggagaacgaacgcatcctggatatgtgctgtgcgccaggag
gcaagaccagctacatagctcagctgatgaagaacacaggtatgatcttggccaacgaca
gcaatgccgagcggctgcgtagtgtggtagggaacttgcatcggctgggagtcaccaatg
ctgtagtcagtaattgcgatggacgccagttccccaaggtgcttggagggtttgaccgtg
tcttgctggacgctccttgtagtggaacaggcatcatttccaaggatcctgctgtcaaaa
ccaacaaggatgagaaggacatcctccgctgtgctcacctgcagaaggagctgattctca
gtgctatagattcagtcaatgctgcctcagagacaggaggctacattgtctactgcactt
gctccatcacggtggaggagaatgagtgggttgtggattatgccctgaagaaacgcaacg
ttcgtttggtggccaccggcctggactttggcaaggaaggcttcaccaggttcaaggacc
gtcgtttccacccctccctcaagtctacccggcgtttctatccccacacgcacaatatgg
atgggttcttcattgccaagttcaagaaattatctaacgccatcccccaggcacaggaag
atgaagaacctgctgtggaagcagcaagtcagtccactgtccctgatgctgtcacagagc
ctcagccaaaaaagaagaaacttgagggatcaaaagctgacaaagaacagaagccaccac
agcctgctttgaagaagagacgttcattgcaggcacagaggagacccttgaaggctggcc
ggccttccaccaaaatgatgcgtcctcaagtccctaccaggaagaagcacagagtaaaac
caaatggacagtga
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integrated database retrieval system
