Antrostomus carolinensis (chuck-will's-widow): 104520481
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Entry
104520481 CDS
T08541
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acar03036
]
104520481 (TDRD12)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104520481 (TDRD12)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104520481 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
ERCC3_RAD25_C
PPV_E1_DBD
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
104520481
NCBI-ProteinID:
XP_010160484
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MEVFVLEIEDPGCFWVTIKGCGPYIVDEVEYKNLNAKMNQFYDNPYRDVDEVKPLTVEEG
QICVVFSEELKCWCRAVIKSIMFCTDHYQMECFLVDYAKYVFVKSKDIRIALEAFMQIPY
RAKKCRLYCTKPVTLRINFSENTAKIVPAKRWDSAATRYFKSLLQATTQMKAQLCAVDDN
TLEVLLYVTINDEKVCINDDLVSKNFARFEEAEENTGSSADYQENQMSLNAECLPEKIVN
PAPAFKPVLFQDKVSTNDETGPAVSSSFFEETYQMPSTDLNENAVSSFQKLGEERNFVFL
SNKIEPSSVLETAPVFDNLKKELARKNFVPSFTESYCWPPIARGCDVVAISYQGNDPFIY
IPPVLTFLQLKSCYKALPNKNGPLALILCPGWKKAELVFELLKTYERRSRRLHPILIILG
QNKEAAESVKIQGCEIIVTTPCSLLRLFDHHGFLFCRLCHLVLDEIEVLFSDTAEQVFAI
LDYYKKAPKCEYSPQQIIAVGIHWNKHIARLIKEFMNDPYVVITAMEEASIYGNVQQVVQ
PCTDSERTAVLLKILDFTDNNVQKVLVFTDSVEEAEMVHKALKSDTVFALKFHKECKFNF
KYILEQWTKKRHSGTHVVLVLTDDCMQPLGITDATCVIHFSFPSRRLFGQRLHSMSDNFS
NGIKNSSVDQEYRKATSVILLTENSARHAPGILQYLHRAEAEIPPKLHEFTTKTLEAEED
KKFSRPLCAYLKTFGICKKRRVCQNRHRINLQIDVPQNIPDKITRTPGCVTILPLHIVHA
TNYFGRIVDKEKDQYTILAEEINEYFKKPSNKIAAKNVEKLAFYGLCEKTLFHRVQVLEI
SAKEEENVFFNVKVKYVDEGRTSQVQSYQLLHLPAMFQCLPPQAVEFIICRVKPIDNETE
WNPEVTSYIHHKIKGKLHEAKIVHTLGNTVWVDPMVRITRLPDLKMSINEYSVRSEILAT
GLGTDNPEHITELQKLCGHMKVLDHAKNLEPLSIKEDAVGPENVSNPQNISTQEDSTENS
NSSEIILGNGPCDGVAQTKEVEDSTLHQRKCFYPEVKWFQNEETITMKVKIPSVADCKCE
FSKEKVVFSACSGDKLYLADLELNQYILAEKSTYVIKDKEAVIVLAKEEKGAWCKLLKNK
NHHVSFDFEHLEDFEDKSPFPVGTKKLHCLAAVTEELVDSSEDSGTESDE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttttgtattagagattgaagatccaggttgcttttgggttactataaaaggc
tgtgggccttacatagttgatgaagtagaatataaaaacctgaatgccaaaatgaatcag
ttctatgacaacccttacagagatgtggatgaagtaaaaccactaacagtagaagaaggc
cagatttgtgtggttttcagtgaggaactcaaatgctggtgtagagcggttattaagtcg
atcatgttctgtacagatcattatcaaatggaatgttttcttgtggattatgccaaatat
gtatttgttaaatcaaaggacattcgaattgcgctggaagcatttatgcagatcccatat
agagcaaaaaagtgtaggctgtattgcacaaagccagtgacgctgcgtatcaacttttct
gaaaatactgcaaaaatagtaccagccaaaagatgggatagtgcagctactcggtatttt
aaaagccttctccaagcaactacccaaatgaaagcccagttgtgtgctgtagatgataac
acacttgaagttttactttatgtgacaataaatgatgaaaaggtatgcattaatgatgat
cttgtctcaaagaactttgctcgttttgaggaagctgaagagaatacagggagttctgca
gattatcaggagaaccaaatgtcattaaatgctgagtgtcttccagagaaaattgttaat
cctgcacctgctttcaagccagtgctgtttcaggacaaggtatcaacaaacgatgaaaca
ggtcctgctgtttccagttccttttttgaagagacataccaaatgccaagcacagatcta
aatgaaaatgctgtgtctagttttcagaagcttggtgaagagagaaactttgtctttctt
agcaacaaaattgagccatcgtcagttctggaaacagcaccagtttttgataatctgaaa
aaggaacttgctcggaaaaattttgtccctagcttcacagaatcttactgttggccacca
atagctcgaggatgtgatgtagttgccatctcatatcagggaaatgatcctttcatatat
attccaccagttcttacatttttgcagttgaaaagttgctacaaagccttgccaaacaag
aatggaccactagcacttattttatgtcctggatggaagaaggcagaacttgtttttgag
ctactgaaaacgtatgagagacgctccagacggcttcatccgatattgataatacttggg
cagaataaagaagcagctgaaagtgtgaaaatccaaggatgtgaaataattgtgactaca
ccgtgtagcctcctgagactgtttgaccatcatggttttttattttgtagactttgccat
cttgttcttgatgagattgaggtactgttctctgacactgctgaacaggtttttgctata
ttagattattacaagaaagctcctaaatgtgagtattcaccacaacagattattgctgtt
ggaattcattggaataaacatatagcacgcttgataaaggagttcatgaatgatccttat
gttgtgataacggctatggaagaagcttccatctatggaaatgtgcaacaggtcgtgcaa
ccttgcacagatagtgagagaactgctgtgttactcaaaatactggattttacagacaat
aatgttcagaaggtgctggtattcactgattcagtagaagaagcagaaatggttcataag
gcactgaagagcgatacagtatttgccttgaaatttcataaagagtgcaagtttaatttc
aagtatatcttagagcagtggacaaaaaagcgtcattctggcactcatgttgtgttagtt
ttaacagatgactgcatgcagcctttgggaattacagatgcaacttgcgtgatacacttc
agttttccttctcgaagactctttggtcagcgactccacagcatgtctgacaacttcagt
aatgggataaagaattcttctgtagatcaagaatatagaaaagcaacatcagtcattctg
ctaacagaaaacagtgctcgtcatgcacctggaatcttgcagtatttgcaccgcgcagaa
gctgaaattccaccaaagctgcatgagtttacgaccaagacactagaagctgaagaagat
aaaaaattttcaaggccactgtgtgcctatcttaaaacatttgggatttgcaagaaaaga
agagtgtgtcaaaatcgtcatcggattaatttacaaattgatgtgccccagaacatacca
gataaaattacacgaactcctggatgtgtgacaatactgcctctccacattgtacatgca
acaaactactttggtcgaatagtagataaagagaaggaccaatatacaattcttgctgaa
gaaattaatgagtattttaaaaaacctagtaataaaattgctgctaaaaacgtggagaag
ctagcattttatggattatgtgagaaaacactttttcacagggttcaggtgctagagatt
tcagcaaaagaggaggaaaatgtattctttaatgtcaaagttaaatatgtagatgaaggc
agaacaagtcaagttcagagctatcagctgcttcacttacctgcaatgtttcagtgtctg
ccacctcaagctgtggaatttataatttgtagagtgaaacccattgataatgaaactgaa
tggaatccagaggtaacgtcttatattcatcacaaaattaaaggaaaactacatgaagca
aaaatagtacataccttgggaaatacagtttgggttgacccaatggtccggattaccagg
cttccagatttgaagatgtctatcaatgaatacagtgttcgatctgagattttggctacg
ggtctgggaactgacaatccagaacatataacagaacttcagaagttgtgtggacacatg
aaagtattagatcatgcaaagaacttggagcctttaagcataaaggaggatgcagttggt
ccagagaatgtgtctaatccacagaatatatcaacacaagaagattctactgaaaactct
aattcttctgaaattattcttggaaatggtccatgtgatggtgtagctcaaactaaggaa
gtggaagactctaccctgcatcagcgaaaatgcttttatccagaagtaaaatggtttcaa
aatgaagagactattacaatgaaggtaaaaataccaagcgtagctgactgtaaatgcgag
ttctctaaagaaaaagtggttttcagtgcttgttcaggagacaaactttatttggccgac
ctggagctgaatcaatatatacttgcagaaaagtctacgtatgtgattaaggataaagag
gctgttattgttcttgcaaaagaggaaaaaggagcatggtgcaaattactgaaaaacaag
aatcatcatgtgtcttttgattttgaacacttggaagattttgaagataaaagtcctttt
ccagttggtactaaaaaattgcattgccttgctgcagtaactgaagaattggttgactcc
tcagaagacagtggaacagaaagtgatgagtaa
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integrated database retrieval system
