Antrostomus carolinensis (chuck-will's-widow): 104520526
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Entry
104520526 CDS
T08541
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acar03036
]
104520526 (CHD9)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104520526 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
104520526
NCBI-ProteinID:
XP_028939391
LinkDB
All DBs
Position
Unknown
AA seq
2397 aa
AA seq
DB search
MSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKG
RKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRP
LKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEDAKVSAKIKKNSAPLPXXXXXXXXXXILA
WSVENPSEEDAAIVDKILSSRVVKKEISAGMTVETEEFFVKYKNYSYLHCEWATEQQLLK
DKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLV
KWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGN
QLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLAGIKGPFLIIAPLS
TITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEM
ILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFS
LLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII
EVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKIL
GEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL
IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS
DWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRE
NSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRG
STFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDAISGRNSLVIDTPRIRKQTRPFS
ATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGR
FKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPV
PRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLK
QEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTI
RADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMFKDDIEDDVSSPGDL
VIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPAFPVQTSIGMQP
PYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHK
KTDESLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEERASRTLYRIELLRKVREQ
ALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSA
QRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFEDTKTKNENLKEDPQ
SSEDESMSTEETQTIMKSEPLSPKNGTPIQNTDHKPSVKAETDRRMVAARTEPLTPNPAS
KKQRVRKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASS
SSSSSSSSSSSSSSSSSEESDSDEEEAQKREGTPHIKAYDEESVASLSTTQDETQDSFQM
NNGTPNSTYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPTARRSYDSNTVASFY
TTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVREKEFTVKINDEGGLK
LTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPKSLPESGTSSHLTAS
ANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINSCQVAAGINPALPYTQ
SQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGACIPRMQLHDGR
PKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENPEYGVA
PEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAAATAASVSVN
PLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTGGEAKNMAAMFPMLLS
GMAGLPNLLGMGGLLTKSTESISEEKRGSDSKEADIKKERTEDQNTDTGGENSVSSSPST
SSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSESNDTGSAKPT
EEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaagaagcagaagaaaaaagcagactcggaaagtaaacaagagaaggcaaat
cgcataatatctgaagcgattgcaaaagcaaaagagagaggagagagaaacattccacga
gtaatgagtcctgaaaacttccccagtgtttcggctgaaggaaaagaggaaaagaagggt
agaaaagttaaatccaaaccgaaggacaaggagagcaaaaaaccaaaaactggttcctcg
tccaaaattaaagagaaaacaaaaattggaaagctaatcatcacactgggtaagaagcag
aaaaggaaaaatgaatcttcagatgaattgtctgatgcgaagcaaactccgcagcggcca
ttaaaagatgaagactcacagaaaagaagatcaaatcgtcaagttaaaaggaaaaaatat
gctgaagaaggagaaggaaaacaatcagaagaagatgctaaagtttctgcaaaaatcaaa
aagaattctgcccctttaccnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaatactggct
tggtctgtagaaaatccaagtgaagaagatgcagcaatagttgacaaaatcttatcctcc
agggtagtaaagaaagaaatatctgctgggatgacagtagaaacagaagagttttttgta
aaatacaagaactactcttatctccactgtgagtgggccacagaacaacagcttttaaag
gataaaagaatccagcagaaaataaaacgattcaaactaaggcaagcacaaagagctcac
ttctttgcagatatggaagaagaaccttttaatcctgactatgttgaagtagaccgggtg
ttagaagtatctctttgtgaagataaggacactggtgagcctgttatttactatttagta
aaatggtgttcattgccatatgaagacagtacgtgggagctgaaagaagatgtagatcaa
gcgaaaatagaagaatttgaacaattgcaagcttccaggcctgactcaaggagattggac
cgaccgcctccaaactcctggaagaagatagaacagtccagggaatataaaaatggcaat
caactcagggagtatcaactggaaggacttaactggctcctattcaactggtacaatagg
cgaaattgcattttagcagatgaaatgggtcttggcaaaaccattcagtcaattacattc
ctctatgaaatcctcctggctggtataaaagggccttttctgatcatagctccgctttcc
actataacaaactgggaaagagagtttcgcacatggactgaccttaatgttgtagtgtat
catggaagtatgatcagcaggcagatgattcagcagtatgaaatgtacttcagggactcc
cagggacgtattgttcgaggtacctacagattccaagctattatcaccacttttgaaatg
attcttggtgggtgtccagagttaaatgcaattgaatggcggtgtgtcattattgatgaa
gctcacagactgaagaacaaaaattgcaaactcttggaaggactaaaattaatgaacctt
gagcataaagtgctgttaacgggtactccactgcagaacactgtagaagaattatttagc
ctcctccatttccttgaacctttgcgttttcctgcagaatctacattcatgcaagaattt
ggagaccttaaaacagaggaacaggttcagaaattacaagctatcctgaaacccatgatg
ctcagacgtttaaaggaagatgttgaaaaaaagctggctcctaaggaggaaactataatt
gaagtagaactaactaatattcagaagaaatattatcgggcaattttggagaaaaatttt
gctttcttatccaaaggagcagggcaggcaaatgtacccaatctggttaacactatgatg
gaactcagaaagtgttgtaatcacccttatctcatcaaaggtgctgaagagaaaatcctt
ggagagtttaaagaaacctatagtccaagtgctcctgacttccatctgcaagcaatgatc
cagtctgctggtaaattggttcttattgataaacttcttccaaaaatgaaagcaggaggc
cacaaggtccttatcttctctcaaatggtgcgctgccttgatattttggaggattacctt
atacataaaagatacttatatgaacgaattgatgggcgagtacgagggaatctcagacaa
gctgcaattgaccgcttcagcaaaccagattctgatcgctttgtcttccttctgtgcacc
agagctggtggtttgggcattaatttgactgcagcagatacgtgtataatttttgattct
gactggaatcctcaaaatgatctgcaggctcaagcccgttgtcacaggattggtcagaac
aaagcagtgaaggtctacagactgataacacggaactcctatgaaagagagatgtttgac
agagcgagtctgaaactgggactggataaggctgtcttacagagtatgagtggaagagaa
aacagtgtcggtggtatccaacaactctccaaaaaggaaatagaagacttgcttcgaaga
ggtgcatatggtgccattatggatgaagaagatgaaggctctaaattctgtgaggaagac
attgaccaaattttgcagcgacgtactaaaacgatcacaattgaatcggagggaaggggc
tccacgtttgccaaggctagttttgttgcatctggaaacaggactgatatttcactagat
gatcccaacttctggcagaaatgggccaaaaaggcagaaatagatctagatgctatcagt
ggtagaaacagcctggttattgatactccaagaattaggaaacaaacacggccctttagt
gctacaaaagatgagctggctgagctgtctgaagtggagagcgagggtgatgataaacca
aaactccgcaggccttgtgaccgttccaatggatacggaaggacagagtgctttcgggtg
gaaaaaaacttgctggtctatgggtggggtcgatggagagagattttgtcacatggtcgc
ttcaagagacagctgaatgaacaggacgtggagataatttgccgagctctattagcctat
tgccttgttcactacagaggggatgagaaaataaaaagttttatatgggatctcattacc
ccaacagaggatgggcaaacacgagagttacagaatcaccttggtttatcagcccctgtg
cctagaggaagaaaaggaaaaaaagtgaagactcaggctagcacttttgatatacacaaa
gcagaatggcttcgaaaatacaatccagaacatctgttgcaagatgaaggatacaaaaag
cacataaaacaccattgcaacaaggtcttgcttcgagtaagaatgctgtattacttaaaa
caagaagtcattggtaatgaattccaaaaggtgtttgatggaattgatgccagtgaaatt
gatgtttgggtccctgagccagatcactctgaagtccctgctgagtggtgggatgcagat
gcagataaatcacttctaattggagtttttaaacatggttatgaaaaatacaacactatc
agagcagacccagcactgtgcttcttggaaagggttggcaagccagatgaaaaagcagtt
gctgccgaacagagagcaaatgattatattgatggggatgtagaagatccagaatataaa
ccagcaccagcaatgtttaaagatgacatagaggatgacgtttcatccccaggtgatcta
gtaatagcagatggagatggacaaatgatggaaggagacaaaatctattggcctactcag
tctgccttaacaacacgtcttcgccgcctaataacagcttatcaacgaacaagtaaaaat
aggcaggcccagcagatccagccagcattcccagtacaaactagtattgggatgcagcct
ccatatgaagaagctgctctaaatccaaagatggctgctaagattgaaagacagcaaagg
tggacaagaagagaagaagctgacttttacagagttgtgtccacatttggagtggtgttt
gatcctgaaaggggacgatttgattggaccaagtttagagcaatggctagactgcataag
aaaactgatgagagcttagagaagtacttgtatgcatttatgtcaatgtgccggagagtc
tgtcgtctcccctcaaaagaagaactggtagacccaagcatttttatccaacccattaca
gaggagcgtgcttctcggacattgtatcgcattgaactcctaaggaaagtgcgagaacag
gctcttagacacccacagttgtttgaacgattaaaactatgccagccaaacccagactta
cctgtctggtgggagtgtgggactcatgacagggatttacttattggagctgctaaacat
ggagttagcaggactgattatcatattcttcgtgatcctgaactctcatttatgtctgcc
cagaggaactataatcaaaataaagtggcgctctcaaggacttctactccgctcttgcat
cagtaccagatggcattatctgcttctcctcttacacctcagtcaagattgtcagatgct
aaagtcaatgcttttgaggacacaaaaactaaaaatgaaaatttgaaagaggacccacag
tcttctgaagacgaatctatgtctacagaggagacacagacaataatgaaatctgaacct
ttgagtccaaaaaatggcacaccaattcaaaatacagaccacaaacctagtgtgaaggct
gaaacagacaggcgcatggtggcagcaaggacagagcctctaactccaaacccagcttcc
aaaaaacagagagtcaggaaaagaggatctgactctagctctgactcggactctgactca
gacagatcatcctgttcttccaggtcatcttcttcatcctcttcatcttcctcatcttgt
tcacactctcgttcaggctctagctcttcatcatcttcatcttgttcttcagcatcttcg
tcgtcctcctcctcatcctcatcgtcatcatcgtcgtcatcatcatcgtctgaagagagt
gatagtgatgaagaggaggcacaaaaacgtgaaggaacgccgcatataaaagcatatgat
gaagagagtgtagcttctctgagtacaacacaagatgagactcaagacagtttccagatg
aacaatgggacaccaaactccacttatctcctacaaggtggatacatgttggctgcatcc
tactggccaaaggatcgagttatgattaatcgacttgatagtatttgtcaaacagtgttg
aaaggtaaatggcctacagcaagaaggagctatgacagcaatacggtggcatctttctac
acaaccaaacttctggacagccccggtgcagctgcagattacagtgagcccagtgcacca
acaccccctcttgcaggtgttaaagaagaatatgatcagtcaccacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaa
ttgacttttcagaagcagggactgtctcagaaaaggccatttgaaagtgaggaaggtgca
ttgggacagcagcaatacctggctcggctacgtgaactccagaatgcttcagaaaccagc
cttgtcaacttcccaaaatcacttcccgaatcaggtacttccagtcacttaacagccagt
gccaatggagtcatagttgacagtcagcctgttgtcaaaaagaggaggggaagaaggaag
aatgtggagggagttgatgtcctctttataaatagaaataaacagcctaatcatgttaat
ccaggtattaactcctgtcaagttgctgcaggaataaacccagcactcccttacacgcag
tcccaaggcatgcttgatgcagagagtccggttcctgttattaacctaaaagatggaacg
aggcttgcaggtgatgatgccccaaaaagaaaagatttagaaaggtggcttaaagaacac
cctggatacgttgaagattcaggagcttgtattcctaggatgcagttgcacgatgggagg
cccaaacaaaaaagacaccgttgtcgaaaccctaataaactggacgttaatagtttgact
ggtgaagaacgtgttcagctcatcaatagaagaaacgcaagaaaggtggggggtgcattc
gctccccctttgaaggatttgtgcaggttcttgaaagaaaatccagaatatggagtggct
cctgaatggggagaagttgtaaaacagtctggatttcttccagaaggtatgtttgaccga
attctcactggacctgttgtgcgggaagaagtaagccggagaggaaggcgccccaaaagt
gagattgccaaggcaacagcagctgcagcagctgccactgctgcgagcgtatccgttaac
cctctgctagccaacggattgcttccaggggtggatctgcctagtcttcaggccttacaa
cagaacctgcagaacctgcagtcgctgcaagtgacagcaggattaatgggaatgccagct
ggcttaactactggaggagaagcgaagaacatggctgccatgttccccatgctgctgtca
gggatggctggattaccaaacttgctgggcatgggaggacttctgacaaagtctacggaa
tctatttcggaggaaaaaaggggaagcgattcaaaggaggcagatataaaaaaagaaagg
acagaagaccaaaatacagacactggtggtgaaaactctgtttcaagttctccttcaaca
tcctctgctgctgcagctgccaatcctctctctcttaacccattacttttgtccaacata
ctttacccagggatgcttctcactccaggccttaatcttcatatcccagctttgtctcag
tctaatatttttgatgtacagaacagtgaaagcaatgacacaggctcagccaagcccaca
gaagaaaaggaggaaaattctagggttagagatcaggaagacaaagggggaacagagcca
agctctcacaatgaaaacagcacagatgagggttcagagaaagcagatgcttcatctgga
tctgatagtacatcgtcttcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
