Antrostomus carolinensis (chuck-will's-widow): 104520556
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Entry
104520556 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V
KO
K06487
integrin alpha V
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04081
Hormone signaling
acar04145
Phagosome
acar04148
Efferocytosis
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
acar04514
Cell adhesion molecules
acar04810
Regulation of actin cytoskeleton
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104520556
04512 ECM-receptor interaction
104520556
04514 Cell adhesion molecules
104520556
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104520556
04148 Efferocytosis
104520556
09144 Cellular community - eukaryotes
04510 Focal adhesion
104520556
09142 Cell motility
04820 Cytoskeleton in muscle cells
104520556
04810 Regulation of actin cytoskeleton
104520556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acar04131
]
104520556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104520556
04515 Cell adhesion molecules [BR:
acar04515
]
104520556
04090 CD molecules [BR:
acar04090
]
104520556
Membrane trafficking [BR:
acar04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104520556
Exosome [BR:
acar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104520556
Exosomal proteins of epithelial cells
104520556
Cell adhesion molecules [BR:
acar04515
]
Integrins
Integrin alpha subunits
104520556
CD molecules [BR:
acar04090
]
Proteins
104520556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
LYRIC
ITGAX-like_Ig_3
DctQ
Motif
Other DBs
NCBI-GeneID:
104520556
NCBI-ProteinID:
XP_010160575
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MAKQWQVIIPVSAPTEAELLRMSVHTRSCPQRRVGADGCVMIFLLVGAPKANTTQHNIVE
GGQVLKCNWNSNRNCQPIIFDSTGNRDFAPNDPLEFKSHQWFGASVRSKNDKILACAPLY
HWRTETKQEREPVGTCYLLAGSKSVEYAPCRSTTIDADGQGFCQGGFSIDFTKGDRVLLG
GPGSFYWQGQLISDRVTEIVAKYDSKVYSTKYDDQLATRPASAAFDDSYLGYSVAVGDFN
GDGMEDFVSGVPRAARTLGMVSIYNGKNMSSMYNFTGEQMAAYFGYSVAATDINGDNYTD
LFIGAPLFMDRGSDGKLQEVGQVSICLQRGSGGFQITKLNGFEIFARFSSSIAPLGDLDQ
DGFNDIAVAAPYGGEDKRGLVYIYNGRANGLNAVPSQILEGQWAARSMPPSFGYSLKGAT
DVDKNGYPDLIVGAFGVDTAVLYRARPVIRVNAALEVNPTILNPENKACSLSDVKVSCFK
VKFCLKADGKGKLPNTLNFQVELLLDKLKQKGAIRRALFLHSKQPSHSKNMTITKGGKMN
CEELDAFLRDESEFRDKLTPITIFMEYRLDYRTAADATGLHPILNQFTPANMSRQAHILL
DCGDDNICKPKLEVSVESDQKQIYIGDDNPLTLIVSAENQGEGAYEAELFVIVPPQADFI
GVVRNNEALARLSCAFKTENQTRMVVCDLGNPMKAGTKLLAGLRFSVHQQSEMDTSVKFE
LQIRSSNLYDNVSPVAFYQADLAILAAVEIRGVSSPDHIFLPIANWQPKENPETEDDIGP
LVQHIYELRNNGPSAFSKVMMTLQWPYKYKNYTLLYIVQYEIDGPMNCTSDTEINPLKIK
VSASKDDEKNETLSREDNHNHRISRRDLSAVEGDVHTLGCGTADCLKIVCQVGHLEXXXX
KSAILYLKSRLWTQTFMNKENQNHSYSLKSSASFNVIEFPYKNLSFEDIHNSTVVTTNIT
WGIQPQPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENG
EGTSEA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagtggcaagtgattattcctgtaagtgcacctaccgaagctgaactgctg
aggatgtcagtgcacacccggtcttgtccacagcgtcgtgttggggcggatggttgtgtc
atgatatttttactggtcggagctccaaaagcaaacactacccagcacaacatcgtagaa
ggaggccaggtgctcaaatgtaactggaattcaaacagaaactgccagcccattatattt
gactccacaggcaacagagattttgctcctaatgatcctctggaatttaagtctcatcag
tggtttggagcctctgtgagatcaaaaaatgataaaattctggcctgtgccccattgtac
cactggagaactgaaacaaaacaagagagagagccagtaggaacttgttacctgcttgct
ggatctaaatctgtggaatatgcaccctgcaggtcaaccactattgatgcagatggacag
ggattttgtcaaggtggatttagtattgactttacaaagggagacagagtgctacttgga
ggacctggaagtttttactggcaaggccaacttatttctgatcgagtgacagagattgtg
gctaaatatgactccaaagtctacagtacaaaatatgatgaccagttagcaaccagacct
gccagcgctgcttttgatgacagttacttgggttattcggtggctgttggagacttcaat
ggcgatggcatggaagactttgtatctggagtcccaagagcagcaagaaccctgggcatg
gtgtctatctacaatgggaaaaacatgtcttccatgtacaacttcactggcgagcagatg
gctgcctattttgggtattcggtggctgctacagatatcaatggggacaattatacagat
ttgtttatcggagcccctctatttatggatcgaggttctgatgggaaacttcaagaggtc
ggccaagtttccatttgccttcaacgaggctctggagggtttcagatcacaaagctgaat
ggttttgagatatttgcaagattcagcagttctattgcacctctgggggatctagatcag
gatggcttcaatgatattgcagttgctgcaccatatggtggagaggacaagagaggactt
gtttatatctataatggaagagcaaatggtttgaatgcagtaccatctcaaattcttgaa
gggcagtgggccgctcgcagtatgccacccagttttgggtactcactgaaaggagccaca
gatgtggacaaaaatggatatccagacttgattgttggagcctttggtgttgacacagct
gttctgtatagggctagaccagttattagagtaaatgctgccctagaagttaatccaacc
atcctaaacccagaaaacaaagcctgttcactatcagatgtaaaagtttcttgcttcaaa
gtaaagttctgcttaaaagcagatggcaaaggaaagctccctaatacactcaatttccaa
gtggaactgctgttggataaacttaagcagaaaggagcgataaggagagctctctttctc
cacagcaaacagcctagccactctaagaacatgactattacaaaggggggtaaaatgaat
tgtgaagaacttgatgcctttttgagggatgaatctgaatttagagacaaattaactccc
attactatttttatggaatatcgtctggattacagaacagctgcagatgcaacaggattg
caccctatcctcaaccagtttactcctgctaatatgagcagacaggcacatattctgctg
gactgtggtgatgataatatctgcaaaccaaagctggaggtttccgtagaaagcgatcag
aaacagatctatattggtgatgacaatcccttgacactaattgtcagtgctgagaatcaa
ggggaaggagcctatgaagcagaactgtttgtcatcgttcccccccaagcagatttcatt
ggcgttgttcgtaacaacgaggctttagcaaggctctcatgtgcatttaaaacagagaat
caaactcgcatggtggtttgtgacctgggaaatcccatgaaagcaggaactaagctctta
gctggcctgcgtttcagtgtgcaccagcagtctgaaatggatacctccgtgaagtttgaa
ttgcaaatccgaagttccaacctgtatgacaatgtaagtccagtagcattctatcaggct
gaccttgccattttagctgctgttgaaatcagaggtgtgtcgtctcctgatcacatattc
cttccaattgcaaattggcagccaaaggagaatccagaaacagaagatgatattgggcct
ctagttcagcatatctacgagctgagaaacaatggtccaagtgcattcagcaaggtgatg
atgactctgcagtggccttacaaatataaaaactacacactgttgtatattgttcagtat
gaaattgatggtcccatgaactgcacttctgatacagaaatcaatccattgaaaattaag
gtttctgcttctaaagatgatgagaagaatgaaacacttagcagggaagacaatcacaac
catcgtatcagtcgaagggatctaagtgccgttgaaggagacgtgcatactttgggctgt
ggaactgctgattgtttaaagatagtctgtcaagttggccacctggaagnnnnnnnnnnn
aagagtgcaatattgtatttaaaatcacgcctttggacccaaactttcatgaataaagaa
aatcagaatcactcctattctcttaaatcatctgcttctttcaatgttatagagttccct
tataagaacctttcctttgaagatatccacaattctacagtagttactacaaatattaca
tggggcattcaaccacagcctatgcctgtgccagtgtgggttataattctggctgtccta
gcaggattactgctcttggctgttctagtgtttgttatgtacaggatgggctttttcaaa
cgtgtgagaccacctcaggaagaacaagaaagagaacaactgcaaccacatgagaatggg
gaaggaacatcagaagcttaa
DBGET
integrated database retrieval system
