KEGG   Antrostomus carolinensis (chuck-will's-widow): 104520587
Entry
104520587         CDS       T08541                                 
Symbol
SF3A3
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104520587 (SF3A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acar03041]
    104520587 (SF3A3)
Spliceosome [BR:acar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104520587 (SF3A3)
 Complex B
    104520587 (SF3A3)
 Complex C
   U2 SnRNP specific factors
    104520587 (SF3A3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3 SF3a60_bindingd SDE2_2C
Other DBs
NCBI-GeneID: 104520587
NCBI-ProteinID: XP_010160619
LinkDB
Position
Unknown
AA seq 436 aa
LRKEELSAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARDNPSEEAQN
LVEFTDEEGYGRYLDLHDCYLKYINLKSSEKLDYITYLSTFDQLFDIPKERKNAEYKRYL
EMLLEYLQDYTDRVKPLLDQNELFGKIQTEFEKKWENGTFPGWPKETSSALTHAGAHLDL
SAFSSWEELASLGLDRLKSALLALGLKCGGXGTDSGXXXXXXXXXXXLEALDPSLFAKNP
KTKGSKRDTERNKDLAFLEAQIYEYVEVLGEQRHLTHENVQRKQARTGEEREEEEEEQIS
ESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRH
FAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKQQKASERWQPDTEEEYEDSSGN
VVNKKTYEDLKRQGLL
NT seq 1312 nt   +upstreamnt  +downstreamnt
cttacggaaggaagaactcagcgccatttcagggccaaatgaatttgcagaattctacaa
cagactgaaacaaattaaggaatttcaccggaaacacccaaatgagatctgtgttccgat
gtcagtggagtttgaggaactgttgaaggccagagacaacccaagtgaagaagctcaaaa
tctggtggagttcacagatgaggaagggtatggacgatacctagatctgcatgattgcta
tctcaagtacattaacctaaaatcatcagagaaactggattacatcacttacttatccac
atttgaccaactctttgatattcccaaggagagaaaaaatgctgaatataagaggtacct
tgaaatgcttcttgagtacctacaggattacacagatcgagtgaaaccattactggacca
gaatgaactttttgggaagattcagactgagtttgagaagaagtgggaaaatggaacatt
ccctggctggccgaaagagaccagcagtgcactcactcatgctggagcccacctggatct
ctcagcattttcctcttgggaggaattggcctccctgggactggacagattaaaatcagc
tttactggccctgggactaaaatgtggcgggtaaggcacagactctggannnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnccctagaagcactcgatccttccttgtttgctaagaatcc
aaagacaaaaggaagcaaaagagacactgaaagaaataaagatcttgcattcctggaagc
tcagatttatgagtatgtagaagttctgggggaacagagacacctcactcacgagaatgt
gcagcgtaagcaagcacggacaggggaagagagggaggaggaggaggaagagcagatcag
tgagagtgagagtgaagatgaagaaaatgaaataatttataatcctaaaaacctgcctct
tggttgggatggcaagccaatcccatactggttatataaattacatggtttaaacatcaa
ctacaattgtgagatttgtggtaactacacctaccgagggcccaaagcttttcagcgtca
ctttgcagagtggcgacatgctcatgggatgaggtgcctgggcattcccaacactgcaca
ctttgccaacgtcacacagattgaggatgcagtctcgttgtgggcaaagctgaaacaaca
gaaggcttcagagagatggcagcccgatacagaggaggaatacgaggattccagtgggaa
tgtggtgaataaaaagacctatgaagacctgaaacgtcaagggctgctgtag

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