KEGG   Antrostomus carolinensis (chuck-will's-widow): 104520608
Entry
104520608         CDS       T08541                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104520608 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acar03009]
    104520608 (WDR43)
Ribosome biogenesis [BR:acar03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104520608 (WDR43)
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_THOC3 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_SPT8 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_TEP1_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_RIG_1st WD40_like UTP15_C DUF6235 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 104520608
NCBI-ProteinID: XP_010160642
LinkDB
Position
Unknown
AA seq 585 aa
DGPQRKKRKSEVAEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHENRVNCVRWHQ
ENCCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVTSLCISPDGKMLLSAGRTIKLWDLE
TKEVYRHFTGHATSVSSLMFTTVKPMNENKPFDGITGLYFLSGAIHDRLLSVWQIRSDRK
EKNAVMSFTVTDEPTFIDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKPLTSNCT
IQIATPGNDGDSTPKPVPILAAAFCSDKQSLLLVYGNTLQPIIEKVSLNTTESHVCLIRD
IQKVLSLKTDVAVTKVKTPVVNSDTKVLVPGIPGHSTAVKTPSLGKEKKKNKRKPGETEE
SIEERLEALDIDVRKVKAPGGLPQTDSFAVLLVQGLESNDAEILNRVLNTRKENVIKNTV
ARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTLHASYLSTLPDLIPQLGMLYQL
MESRVKTLQKLSRLHGRLFILVTQVAASEAAQDVTEVNQTAKLVYEDESSEEEGSDDEMI
ADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq 1758 nt   +upstreamnt  +downstreamnt
gatggccctcagaggaaaaaacggaagtctgaagttgcagaagtggacaagcagttagat
atcctggctattggtacagcagttggtagcattttgttgtacagcacagtaaaaggagaa
ttacagagcaagctagatggtggtcatgaaaatagagtaaactgtgtgagatggcatcag
gagaactgttgcttatatagctgttcagaggacaaacacattgtggaatggaacacacag
acctgcaaagtaaagtgcaagtggaaaggcgacaatagcagtgtcacctctttatgcatc
agtccagatgggaaaatgctgctgtcagcgggtagaactataaaactgtgggacctggag
accaaagaagtctacagacatttcacaggccatgctacatcagtgtcatcattaatgttt
accacagtgaaacctatgaatgaaaataagccctttgatggaattacagggctttatttc
ttgtctggagctatacatgaccgattactgagtgtatggcagatcagatcagataggaaa
gaaaagaatgctgtgatgtctttcacagtaacagatgaaccaacttttattgacctgact
gtatcagaagtcaaagaagagcctgtgaagttagcggttgtgtgcagagatgggcagttg
catttatttgaacatatcttaaatggttattgcaaaaaacccttaacatcaaactgtact
atccagatagcaacgcctggaaatgatggggactccacaccaaaaccagtccctattcta
gcagctgccttttgttcagacaaacagtctctgctgcttgtgtatggaaacaccttacag
cccatcatagagaaagtgtctctgaacaccactgaatcccacgtatgtttgataagagac
atccagaaagtgttgtcacttaaaacagatgttgctgtaacaaaggtaaagactcctgtt
gtgaactcggacaccaaagttctagtacctggcattccaggacatagtacagctgtcaaa
actccatccttgggaaaggagaaaaagaagaacaagaggaaaccgggagagacagaggaa
agcattgaagagcgcttagaggcgttggatatcgatgtgagaaaagtcaaagctccaggt
ggccttccacaaacagatagcttcgcggtacttttggttcagggcttggaaagtaacgat
gcagaaatcttaaatagagtgcttaacacaagaaaggagaacgtaataaagaacacggta
gccagaatgcctatacatgctgtcattccactgctgcatgagcttacgaagagattgcag
ggcaacccgtacagtgcctcactaatggttcgatggctgaagtctgtttttactctacat
gcatcttacctttccacattaccagaccttattcctcagctgggaatgctgtaccagtta
atggagagcagagtaaaaactttgcaaaagctttcccgtctgcatggaagactcttcatt
cttgtcacccaggttgcagcatcggaagcagctcaggatgtaactgaggttaatcagacc
gcaaagctggtatatgaggatgaatcctcagaggaggaaggctcagatgatgagatgatt
gcagataaagactctgatgaaaactgggatgaagatgaagaaaaagaggagcaatctgat
gaacaggacatgactgttgaaaaggaaatcaatggtgattctgatttggaaccagaaaat
gaaagtgaagaagaatag

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