Antrostomus carolinensis (chuck-will's-widow): 104520751
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Entry
104520751 CDS
T08541
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104520751 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104520751 (HBS1L)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104520751 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
104520751
NCBI-ProteinID:
XP_010160839
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
VIAEENGHANTPQKGLLTEDTSVASGVLEAVSKSTLSPQVVQVSEEQNAVPTPLKKSSKT
KPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQ
ADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
TSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLVEQIDSFKPPQ
RSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPV
DWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFPVL
LHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKCLTKGQNALIELQTQRPIALELYKDFKE
LGRFMLRYSGSTIAAGVVTEIKE
NT seq
1513 nt
NT seq
+upstream
nt +downstream
nt
tgtgattgctgaagaaaatggccatgctaacacacctcagaaaggactgttaactgaaga
cactagtgtagcttctggggtacttgaggcagtatcaaaatctactctttcaccccaagt
agtgcaggtttcagaagagcagaatgcggtgcctactccgttaaaaaagtcaagcaagac
aaagccacaaatagatgtgaaagcagagttggagaagagacaaggaggaaagcaactgct
taatttggtggtaataggacatgttgatgcaggtaaaagcactttaatgggtcatctgct
ctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacaggaatctaagaa
ggctggcaaagcttcatttgcctacgcatgggtcttggatgaaactggtgaagaaagaga
aaggggagtgacaatggatgtgggtatgaccaaattcgagacaaagactaaagtaattac
gctgatggatgctccaggccacaaagacttcattccaaatatgatcacgggagctgcaca
ggctgatgtggctattttggttgtggatgctagcaggggagagtttgaagcagggtttga
gacaggtggacaaactcgagaacatggattattagtacgctctctgggagtgacacagct
agctgttgcagtcaataaaatggaccaggtcaattggcaacaggagagatttcaggaaat
tacaagtaagctcggccaatttcttaaacaagctggctttaaggaatcagatgtggctta
tatcccaacaagtggccttggtggtgaaaatctggtcacaaggggtcagtcaagtgacct
cacacagtggtataaaggaaagtgtttagtagagcaaattgattctttcaagccgccaca
gagatcagtggataaaccatttaggctgtgtgttgctgatgtttttaaagatcaaggatc
gggattttgtgtgactggtaaaatagaagcaggctatattcaagttggagaacgacttct
ggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcatgatgaaccagt
tgattgggctgcagcaggagatcacgttagtctcactttgaccggcatggatatcatcaa
aatcaatgttggctgtgtattttgtgatcccaaggaacccattaaagtctgcactcgttt
cagagctcgggttctcatcttcaatattgaagttccaatcactaaaggatttcctgtgct
cttacactatcaaacagtaagtgaacctgctactattagaagattgttgagtgtcctgca
caaaagtactggtgaagtgacaaagaaaaaacctaagtgcttgactaaagggcagaacgc
tttaatagaactacaaactcaaagacctatcgctctagagctgtataaagattttaaaga
gcttgggaggtttatgttacgctacagtggttccactattgctgcaggagttgtcacaga
gatcaaagagtga
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