KEGG   Antrostomus carolinensis (chuck-will's-widow): 104520957
Entry
104520957         CDS       T08541                                 
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04144  Endocytosis
acar04517  IgSF CAM signaling
acar04530  Tight junction
acar04810  Regulation of actin cytoskeleton
acar05100  Bacterial invasion of epithelial cells
acar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:acar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    104520957
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104520957
  09144 Cellular community - eukaryotes
   04530 Tight junction
    104520957
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104520957
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104520957
   05100 Bacterial invasion of epithelial cells
    104520957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acar04131]
    104520957
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:acar04812]
    104520957
Membrane trafficking [BR:acar04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    104520957
Cytoskeleton proteins [BR:acar04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     104520957
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_HPS5 EIF3I Beta-prop_WDR36-Utp21_2nd Rax2 eIF2A RMC1_N WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd PEP5_VPS11_N
Other DBs
NCBI-GeneID: 104520957
NCBI-ProteinID: XP_028939526
LinkDB
Position
Unknown
AA seq 309 aa
SRPAEIALCPNNHEVHIYRKDGAKWSKVHELKEHNGQVTGIDWAPESNRLVTCGTDRNAY
VWTLKGNIWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHI
KKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPSPTPWGSKMPFGELXXX
XXXXXXXXXXXXXXXXXXXXXXXXXVSHDSTLCLADANKKMAVASLCTETLPLLAVTFIT
ENSLVAAGHDCYPMLFTYEENQGVLTFGGKLDVPKQSSHQISVLTGGKGNCSQFCTTGMD
GGMSIWDVK
NT seq 927 nt   +upstreamnt  +downstreamnt
tctcgccctgcagagatcgccctctgccccaacaaccacgaggtccacatctaccgcaag
gatggagccaagtggagcaaagtccatgagctgaaggagcacaacgggcaggtgacaggc
attgactgggcccctgagagcaaccggctggtgacatgtgggaccgatcgcaacgcctac
gtctggaccctgaagggcaacatctggaaaccaaccctggtcatcctgaggatcaaccgg
gctgcccgctgcgtcaagtggtcccccaaggagaacaagtttgctgtgggcagcggctcc
cggctcatctccatctgctactttgagcaggagaatgactggtgggtttgtaagcacatc
aagaagcccatccgctcaacagtgctcagcctcgactggcaccccaacaacgtcctcctg
gccgccggctcctgcgacttcaagtgccggatattctcagcctacatcaaggaggtggag
gagcggcccagccccacaccctggggctccaagatgccctttggggagctgnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnngggtgagccacgacagcaccctctgcctcgccgatgccaacaagaag
atggccgtggcctcgctgtgcactgagacgctgccgctcctggctgtcaccttcatcacc
gagaacagcctggtggccgcgggccacgactgctacccgatgctgttcacctacgaggag
aaccagggtgtcctgaccttcggggggaagctggatgtccccaagcagagctcccaccag
atctcagtgctgacgggcgggaagggcaactgctcacagttctgcaccacggggatggac
ggtggcatgagcatctgggatgtcaag

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