Antrostomus carolinensis (chuck-will's-widow): 104521130
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Entry
104521130 CDS
T08541
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104521130 (TNRC6A)
03036 Chromosome and associated proteins [BR:
acar03036
]
104521130 (TNRC6A)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104521130 (TNRC6A)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104521130 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104521130
NCBI-ProteinID:
XP_028939598
LinkDB
All DBs
Position
Unknown
AA seq
1966 aa
AA seq
DB search
METNPAFCSRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTVTSTNNNAKRATANSQQQQTLPR
YPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTVTNKQPVTNGEVP
NSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGS
DKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNK
FVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNG
GLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNPGTSIQCSTIGQMSNSQSINSKVGGS
AHGSWGSLQENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINE
LPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNGEAKNGGSYGTTWGAYGSNYSGDK
CSGPNSQANGDTVNATLMQPGISGPGSANFQINGNKGGGVWEAGTVNSQNMPWGSGNGAS
AGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNESVNGNSRKFTNGWKSAEEGDLNSQS
SAAPQITEQNSTWAKTGTGDSEGSSESTGCHEDRVTPEGQNRERRKVDQHALLQSIVNRT
DLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPS
PNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEDKSSWN
DAQKIKQGWVDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSTSGGSDSDRSVSGWNEPG
KSNSVTWGGNNTNPNNSSGWDEPAKSNQNQGWGDPPKSNQPQGWGDSSKPINSPEWNKQD
VGSWGAPSATTKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPS
KYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDN
GTSAWGKPMDTGTSWGEPISDAAGTSGWGNASLGQQASNKPGPKSMQDSWCGDDMPLTGS
RQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGMMKGGNKQDEAWINPFIKQ
FTNLSFSRESPEETIQSNKMDMSGGLLPDKRMEMDKHGLGVGDYNRVVGKGPGSRPQISK
ESSMDRSPYFDKDGIVADESQNMQFMSNQNMKLPPSNNALPNQALGSLAGLGMQNLNSVR
QNGNPSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNNG
GLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQRSMPSGGRQQQEQQGRSL
SMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHTTPELQKGPSPINA
FSSFPIGFCLISTSEISGMNSNLNVNMDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSK
HGAISSGFRLEESPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGE
PWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSI
RASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPP
GLTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGST
LRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEI
SRFFAQGQSLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGT
SLWGSPNYSTSLWGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaccccgctttctgttccagagaattggaagctaaagctaccaaagaagtt
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaaca
aagacaagtgtaagccagcctcagcctgtcacctctaacggcacttccacagtaaccagc
actaataataatgccaagcgggccacagccaacagtcagcagcagcagaccttgcctcga
taccctcctcgtgaagtaccaccgcgatttcgacaccaggaacagaaacagcttctgaaa
cgaggtcagcagttaccagttatagctgcaaacctgggatctactcctaaagtattaaac
ggccagtcaggaggcagcactgtcacaaataaacagccagtgaccaacggagaagtgccg
aacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccct
aaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactgggga
ccagtctcttcaaatagtgactccagcacaaactgggataaagttattgtagacggctct
gacaaagaagcatggccatcaatcactggcagtgacccagagttgacatcagaatgtatg
gacactgactctgcctctagctctgggtcagagagaaacctcgtgataatggcttcaggg
agcacaggtggtgaaaatgatggcattcgaaatggcattggacatggttctcaaaataag
tttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtggggt
ttatcccatggaaccataataagcacatgtcaagtttctgtggatgctcctgacagcaaa
tctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaatgga
gggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggcctgtattggag
aacaatggacatgccctgaaagggtctgtagggagtggtaatcctggcacaagtattcag
tgcagtaccataggtcagatgtctaatagtcagagtattaactctaaagtgggtggttca
gcccatggttcctggggaagtcttcaggaaaattgtgattctgaagtcaatggtacaagg
aaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataac
actactaactttatgacctctagtttaccaaactctgctggttcagtgcagattaacgaa
ctgcctaataatacagggcatggggcctggcgcgtgagcacaatgaatcattctcagatt
caggcctctccagttacaaacggcacttccatttctcatcttagcaatggtgaggcgaaa
aatggtggctcttacggtactacatggggtgcctatggttctaattactctggagacaaa
tgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagcca
ggcattagcgggcctggcagcgctaactttcaaatcaatgggaataaaggaggaggggtg
tgggaggcagggacagtcaactcccagaatatgccatggggaagtggaaatggtgcaagt
gctggcgggagtagaagaggatggggcaaccctgcacaaaacactggcactaacatttca
aatggcgagtggagtaaactgcctagtaatcagcattccaatgagagcgtgaatggaaac
agcaggaagtttacaaatgggtggaagtctgctgaggagggtgaccttaacagccagagt
tctgctgctcctcagataactgagcagaacagcacatgggccaaaacaggtacgggggac
agcgaaggtagttcggagagcactggatgccatgaagacagagtaactccagaaggacag
aatcgagagagaaggaaggtcgaccagcacgcattactccaaagcatagtgaacagaact
gacttagatccacgtgtcctttccaactctggttggggacagactccaatcaaacagaac
actgcctgggataccgagacatcaccaaggggtgaaaggaaaactgacaatgggacagag
gcctggggaggctctgtgacacagacttccagctcagggggatgtgtggatagacctagc
cctaataataatgatacctcatctgtatcagggtggggagatccaaagtctgctacaagg
tggggagactccaaagggtcaaacagccaaggggggtgggaagaagattctgctgctaca
gtaatggtcaagagtaatcaatcatggggaagtggcaaagaggacaagtcatcttggaat
gacgcacagaagatcaaacagggatgggtagatggacaaaaggccagccagggttgggca
gtttctgctggtgatagctggggtgaaaattcaagaagtaaccattggggtgaggctaag
aaatccacttcaggaggtagcgacagtgacagatcagtatctggttggaatgagccgggt
aaatcaaattctgttacttggggaggtaataatacaaaccccaataattcttcaggatgg
gatgagcctgcaaagtctaatcagaaccagggctggggagaccctcctaaatccaatcag
cctcaaggttggggggattcgtcaaagccaatcaactctccagaatggaacaagcaagat
gttggctcttggggagcaccgtctgccacaaccaaacccccggggtccggctggctgggt
ggacctatgccagcaccagcaaaggaggaagaacccactggctgggaggagccatcccct
gaatcaatacgccgtaaaatggaaattgatgatggaacttctgcttggggtgatccaagc
aaatacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagtagcagcagt
tcagaccagcaagcacaggtacatcagcagctactgtcttcaagtgccatgtctagcaag
gagagcagttcgggttctggttggggagagccttctactccagccactactgtagataat
ggaacttcagcgtggggtaaacccatggacactggtactagctggggagaacccatcagc
gatgcagcaggcacctctggctggggaaacgcttctcttggtcaacaggcttcaaataaa
cctgggcctaaatctatgcaagatagttggtgtggagatgatatgccattgacaggcagt
cgtcagaccagctgggaggaggaggaggatgtagagattggaatgtggaacagcagttct
tcacaagaagctaacccatctttaaattggccaccatatatgaaaaaaatgcccacaaag
ggaatgatgaaaggtggaaataagcaagatgaagcatggatcaatccattcattaagcaa
ttcacaaatctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatg
gacatgtctggagggttactgccagataagcggatggagatggataagcacggcctcggc
gttggagattacaatcgtgtggttggaaaaggccctggctctcggcctcagatttccaaa
gagtcttccatggatcgcagtccttactttgataaggatggcattgtagcagacgagtcc
caaaacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaataatgcacta
cctaaccaagcccttggctccctagcagggctgggtatgcaaaacttgaattctgttaga
cagaatggcaatcccagtatgtttggtgttggtaatatagcagcacagcccaggagcatg
cagcagcctccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtgcct
cctccattactatcccctcaggttccagtatcattactgaagtatgcaccaaacaacggt
ggcctgagcccactttttggcccacaacaggtagccatgttgaatcaactgtcccagtta
aaccagctttctcagatctcccagttacagcggttgttggctcagcagcaaaaagcgcag
aatcaaagaagcatgccttctggtggtcgtcaacagcaggagcagcagggtcgatctctt
agtatgcagcaacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaag
cagcaaactccaccctctcaacagcagtcactccatcaacccaccatgaaatctttcctt
gagaatgtcataccccacactactcctgagctgcaaaaagggccatcaccaataaatgct
ttcagcagcttccctataggcttctgtctaatttctacttcagaaatttcaggaatgaac
tcaaacttgaatgtaaacatggatatgagcagtattaaagagccacaatctcgattgagg
aaatggactacagtcgacagcatttctgtgaacacatcattagatcaaaactccagcaaa
catggtgctatttcaagtggttttaggctggaagagtctccatttgttccgtatgacttt
atgaacagcagtaattcaccagccagtcctcctggatctattggggacggctggccccgt
gccaaatcgcctaacggctctagcagtgttaactggccgccagagtttcgtcctggcgag
ccatggaaaggttatccaaacatcgaccctgaaactgacccttacgtcactcctggcagt
gtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaac
agtgggtcatcctcatctttgaacaccacgctgccttcaactagtgcctggtcatccatt
cgtgcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagtagccaga
aacagtgattccaaatcaacgtggtctcctggatcagtcactaacacctctctggctcat
gagctgtggaaggtccctttgccacctaaaagcatcactgctccgtcccgcccacctcca
gggctaacaggccagaaaccaccgttgtccacttgggataattcccttcgtttgggtgga
ggatggggaaattctgatgccagatatacccctggttcaagctggggtgagagcagctca
gggagaataacaaattggcttgttctaaaaaaccttacacctcagattgatggctcaacc
ctgcgtactctgtgcatgcagcacggtccactaataacattccaccttaacctcccacat
ggtaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaaatctctg
cacatgtgtgtattagggaacactactattcttgctgagtttgccagtgaagaggagatt
agtcgcttctttgcacaaggccagtctctgactccgtctcctggctggcaatctctggga
tccagccagaatcgacttggatccattgacggttcccattcgttctcaaaccgtaatgat
ctaaatcactggaatggtgctgggctgtcgggaactagcagtggagaccttcatggcact
tcactttgggggagccccaactattccacgagcctgtggggcaccccgagcagcaatgac
accaggggaattagcagcccatcccccatcaacgctttcctttctgttgaccacctaggt
ggaggtggagagtccatgtaa
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