KEGG   Antrostomus carolinensis (chuck-will's-widow): 104521294
Entry
104521294         CDS       T08541                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104521294 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acar03041]
    104521294 (SF3A1)
Spliceosome [BR:acar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104521294 (SF3A1)
 Complex B
    104521294 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104521294 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104521294
NCBI-ProteinID: XP_010161543
LinkDB
Position
Unknown
AA seq 753 aa
KETGISPGADAPSSKQWIFFLPRNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVS
EFKEGKAQEPSAAIPKVMQQQQSAQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSIS
AFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILI
PPKGLLLKLKKEAENPKEVLDQVYYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFV
VVETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTD
EPPAQLDQDTQVQDMDEGSDDEDEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKP
LPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGL
DIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANI
TLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPT
MPPPVRAAVVSAVPVMPRPPMTSVVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMS
PRPPPMIVPTAFVPAPPVAPVPSPAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRR
NKGPVTVKVQVPNMQDKTEWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYE
GIFIKDSNSLAYYNMTSGSLIHLALKERGGRKK
NT seq 2263 nt   +upstreamnt  +downstreamnt
gaaagaaacaggcatttcccctggagctgatgccccttcatctaaacaatggatcttttt
cctccccagaaatggtccagaatttgaagctcgaattcgtcagaatgaaataaataaccc
caagttcaatttcttgaatcccaacgatccttaccatgcctactaccggcacaaagtcag
cgagttcaaggagggtaaagcacaggagccctcggctgctattcccaaggtcatgcaaca
gcagcagagtgctcagcagcagcttccacagaaggtgcaggcccaggtgatccaggagac
agtggttccaaaagagccacctccagaatttgagttcattgcagatcctccctccatctc
tgcctttgacttggatgtggtgaagctcacggcgcagtttgtggctcggaacgggcggca
attcttgacgcagctgatgcagaaagagcagaggaactaccagtttgacttccttcgccc
ccagcacagtctctttaactacttcacaaagctggtggaacagtacacaaagatcttgat
cccaccgaaaggcttactcctcaaactgaagaaagaggctgaaaatcccaaggaagtcct
ggatcaggtgtattacagagtggagtgggccaagttccaggagcgagagagaaagaagga
agaggaggagaaggaaaaggagcgtgttgcttatgcccagattgattggcatgactttgt
ggtcgtggaaacagttgactttcagcccaacgagcaagggaatttccctcctcccaccac
tccagaagagttgggagctcgaatcctgatccaggagcgttatgagaagtttggggaaag
cgaggaggtagagatggaggtggagtcagatgaggaagatgaaaagcaagagaaaacaga
tgaacccccagcccagctggaccaagacacccaagtgcaggatatggatgagggatcaga
tgatgaagatgaaggtcagaaggttcctcctcctccagagaccccgatgccaccacccct
tcctcccacgccagatcaggtcattgtgcggaaagattacgatcccaaagcctcaaaacc
attaccacccgccccagctccagatgagtatctcgtttcccccatcaccggagagaaaat
tcctgctagtaaaatgcaggaacacatgcgaattggtctcctggatcctcggtggctgga
gcagcgcgatcgatccatccgtgaaaagcagagcgatgatgaggtctacgccccaggttt
ggatattgaaagcagcttgaagcagctggccgagcgccgtactgatatcttcggtgtaga
agagactgccattggtaaaaagattggtgaagaagaaatccagaaaccagaggaaaaggt
gacctgggatggccactcgggcagcatggcccgcacacaacaggctgctcaggccaatat
tactctccaagagcaaatcgaagcgatccataaggccaagggactggtgccagaagatga
cagcaaggagaagatcggtcccagcaaacccaacgaaatcccccagccacctcctccttc
gtcggcatcaaatcccccagctagcgctcagccgatcacatccgtgcctcgtccacccac
aatgccgcctccggtccgcgctgctgtagtttctgcagttccagtcatgcctcggccccc
gatgacttccgtggtccgtttgcctccaggatccgtcatagccacccccatgccaccaat
aatccacaccccgcgcatcaatgtggtccccatgcccccctctgctcctcccatcatgag
ccctcgcccgcctcccatgatagtaccaacagcatttgttcccgcacctcccgtggctcc
ggttccttccccagcaccgatgcctcctgttcacccgccgccaccgatggaggatgagcc
agtctccaagaaactgaagagtgaggatagcctgattccagaggaggaattcctgcgcag
gaacaagggtccagtcacggtcaaagtccaggttcccaacatgcaggacaagacagaatg
gaaactgaacggccaagtgttggttttcaccctgccgctctccgaccaggtgtctgttat
aaaggttaagatccacgaggctacagggatgccagctgggaaacagaagctgcagtacga
gggcatcttcatcaaggattcaaactccctggcttattacaacatgacgagtggctctct
gattcacctggcactcaaagaaagaggaggcagaaagaaatag

DBGET integrated database retrieval system