Antrostomus carolinensis (chuck-will's-widow): 104521458
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Entry
104521458 CDS
T08541
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104521458 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104521458 (ABCA4)
Transporters [BR:
acar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104521458 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
SRP54
MukB
Motif
Other DBs
NCBI-GeneID:
104521458
NCBI-ProteinID:
XP_028939722
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
CLTLDKFEGYRDETQLTRQALHLLEENKFWAGVVFPDMVPTTSSLPPHVRYKIRMDIDAV
EKTNKIKDRYWVAGPRADPVDDLRYIWGGFAYLQDMIEHGIIKTQTNTEVPLGIYLQQMP
YPCYVDDVFMITLNRAFPIFMVLAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWC
TWFIDSFVMMAVSTFLLTALIMCGQVLHYSSPLLFFLFLLTFTTATIMQCFLFSTFFSKA
NLAAACSGVIYFTLYLPHIVCFAWQDRMTVNLKILASLLSQVAFGFGTEYLSRYEEQGLG
LQWDNIRTSPLEGDEYSFLFSIKMMLFDAFLYGIISWYLDNVFPGDYGLPQPWYFPVQIS
YWLGSRNAKAEKTATADEKSPELEGCVDQKAMEGEKDESRTKKSEEPEKPEEKSDNQGEK
DGKTKRCKHKREKGPSEQGKPKTDVQDKDEINMNTFFEPEPTGLIPGVCIQNLVKIFANR
PKPAVDGMNITFYESQITAFLGHNGAGKTTTMSILTGLFPPTSGTVLIGGLDIQAHMDSI
RHRLGMCPQYNILFNHLTVAEHILFYSQMKGRSRDEAEQELETMLEDMGLTHKRNEEAQN
LSGGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMD
EADILGDRVAIISQGKLFCSGSPLFLKNRFGSGFYLTLVRKMKNTRTGQATSLSSCGSQC
SCSCSSCAHKDKGGAPEQELDGDLNKLAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQR
SYASLFRELEETLNDLGLSSFGVSDTPLEEVFLKVTAEADSGVQKTGDTPENGSTLGKTS
AENKPAEQTTLKTNDTSRMPVGIAGDQNEGKGSQQYKGFQLVRQQVKALLIKRFHHASRS
HKDFLAQIVLPASFVLLSLILTLIIPPFGEYPALTLHPWIYGQQYTFFSNEHPGSEQMVS
LTGAFLNKPGFGNRCMKNRPLRNYPCNNKPTAWNTPAVHRNISSLLLSREWSPQNPSPSC
KCSTHKKLTMLPECPAGAGGLPPPQRVQHSTEILQDLTHRNISDFLVKTYPVLIKKSLKS
KYWVNEQRYGGISIGGRLPVLHVSGDQVVNFLSDLGRMMNVTGGQTSLAAAKEISNFLKY
METEDNIKVWFNNKGWHAMVSFLNVANNAILRANLRTGQAPEEYGITAVNHPLNLTKEQL
SEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPVIYWLTNF
VWDIVNYALSAGMVVVIFIGFNKKAYTSPTNLPVLVALLLLYGWAVIPMMYPASSFFSVP
STAYVALSCINLFVGINSSAITFILELFENNPSLLKFTKTLKNLLIVFPHFCLGRGLIDL
AMNQAVTEVYARFGEEHVSNPFQWDFVGKNLVAMAIQGVAFFILNLLMQHHLFSTRWFAE
TAMSPIIGEDEDVAEERKRIMNGGNKTDILELRELTKIYAGRHKPAVDRLCVGIRPGECF
GLLGVNGAGKTTTFKMLTGDTDVTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLT
GREHLYLYARLRGVPAEEIKRVAEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGC
PPLILLDEPTTGMDPQSRRLLWDSIVSVLRDGRAVVLTSHSMEECEALCTRLAIMVKGTF
KCLGTIQQLKYKFGDGYIVTLKIKAPKSGLPPDPTPAEQFIRMNFPGSLQREKHYNMLQY
QICSSSLAKIFQLIISNKENLHIEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGAR
QEAKVYPALHQQAVA
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
tgcttaaccttggataaatttgaaggttatcgtgatgaaactcaactgactcgtcaggcc
cttcatctgctggaggaaaacaaattctgggctggtgtggtttttccagacatggtgcct
acaaccagcagtcttccaccacatgtgaggtacaagatccggatggacatagatgcagtg
gagaaaacaaacaaaatcaaagacaggtactgggttgctggtccaagagctgatcctgtg
gatgatttacgttatatctggggaggctttgcatatctccaggacatgattgagcatggg
attataaagacccagaccaacactgaagtgccattaggaatttatctgcagcaaatgcca
tatccatgttatgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttc
atggtgctcgcttggatatattccgtttccatgactgtgaagagtatagtgttggagaag
gaaatgcgtctgaaagaggccatgaagaacaggggtataactaatggagtgatttggtgc
acttggttcatagacagctttgtcatgatggctgtgagcacattcctcctcacagcactg
attatgtgcggacaagtgctacattatagcagtccacttctcttctttctattcctactg
acattcaccacagccaccataatgcagtgtttcttgttcagcacattcttctccaaagca
aatctggcagctgcctgcagtggagtcatctacttcactttgtacctgccccacattgtc
tgctttgcctggcaagaccgcatgactgttaatctgaagatcctagcaagtttgctttct
caagtagcttttggttttggtacagaatacttgtcacgctatgaagagcaaggtcttggc
ctgcagtgggataacatcagaaccagtcccttggaaggagatgaatatagttttcttttt
tccattaaaatgatgctttttgacgcatttctctacggaataatttcatggtatcttgat
aatgtttttccaggagactatgggctaccacagccttggtatttccctgtacagatatct
tactggctgggctctagaaacgcaaaagctgagaaaacagcaactgctgatgaaaaaagt
ccagagttagaaggctgtgtggatcagaaggccatggaaggagaaaaagatgaaagcaga
acaaagaaatctgaagaacctgaaaagccagaagaaaagagtgacaaccagggggagaag
gatggtaaaaccaaacgatgtaaacacaaacgagaaaaaggacccagcgagcaggggaag
cccaagacagatgtccaggacaaagatgaaattaatatgaataccttctttgagcctgag
ccaacaggattgattccaggagtatgcattcagaacctggtgaagatttttgcgaacagg
cccaagccagcagtagatgggatgaatattactttttatgagagccagatcacagccttc
cttggtcataatggagcaggaaagacaactaccatgtcgatactgacaggcctcttccca
cccacctctggaactgtgctgattggcggtctggatattcaggctcacatggactccatt
cggcacagattaggcatgtgccctcagtacaacatcttattcaatcaccttactgtagca
gagcacatcttgttttattctcaaatgaaagggagatccagggatgaagctgagcaagag
ttggaaacaatgctagaagacatgggcctcacccataaaaggaatgaagaggctcagaat
ttgtcaggtggcatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaa
gtggtagtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgg
gatcttctgctgaagtatcgctcaggcagaacaatcatcctctcaacccatcacatggat
gaggcagacatccttggagacagagtagccatcatatcccaagggaaactcttctgctca
ggctctcctctcttcctaaagaaccgctttgggtctggcttctatctcactcttgttcgc
aagatgaaaaacaccagaactggacaggccacatcactttctagctgtggatctcagtgt
tcttgctcctgctccagctgtgcacacaaggacaaaggaggagctccagagcaagaactg
gatggagatctgaataagttagcagaagtaattcatcatcatatcccagaagcaaaatta
attgaaagcattggtcaggaactcatttaccttttgcccaataaaaactttaagcaacga
tcttatgctagtctcttcagagaactggaggaaacactgaatgacctgggactcagcagt
tttggagtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgac
tctggagtgcaaaaaacaggagacactccagaaaatggttctactcttggcaaaacttct
gctgagaacaaaccagctgaacaaaccacactgaaaactaatgacacttctcgaatgcca
gtaggcatagcaggagatcaaaatgaaggcaaggggtcccaacagtataaaggttttcag
cttgtacgtcagcaggtcaaagcactgctcatcaaacggtttcaccatgcctcccgcagc
cacaaggatttcctagcccagattgttctccctgctagttttgtgttgctgtctttaata
cttacactcattattcctccatttggagaatatcctgccttaaccttacacccttggatc
tatggacaacagtatactttcttcagcaatgagcatcctggcagtgagcagatggtctcc
ctcactggtgctttcttgaataaaccaggatttggaaatcgctgcatgaagaatcggcct
cttcggaactacccatgcaataataagccaactgcctggaacacacctgctgttcatcgt
aacataagcagcctcctgctgagccgagagtggagccctcagaatccttcaccttcctgc
aagtgcagcactcacaagaaactcactatgctgccagaatgccctgcaggcgcaggaggc
ctcccaccaccacagagagtgcagcacagcacagaaattcttcaagatctgactcacaga
aatatttcagattttctggtgaaaacatatcccgttttgataaaaaagagcttgaagagc
aaatactgggtcaatgagcaaagatatggaggaatttctataggagggaggctcccagtc
cttcatgtttctggagatcaagttgtcaattttttaagtgatcttggccgaatgatgaat
gtgacaggaggacaaacctcactggctgctgctaaagaaatttctaatttccttaaatac
atggaaactgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggtt
agtttccttaatgtagccaataatgcaatccttagagctaacctgcggactggtcaagcg
cctgaggaatatgggatcactgctgtaaaccatcctctgaaccttactaaggagcagctc
tctgaagtcactgtgctgaccacttcagtggatgctgttgttgccatttgtgtgattttt
gccatgtcctttataccagccagttttgttttatacctgattcaagaacgtgtaacgaaa
gccaagcatctacagtttgtcagtggtgtaagccctgtgatctactggctaactaacttc
gtgtgggacatagtgaattatgcactgagtgctggaatggttgtggttatattcattgga
ttcaacaagaaagcttacacctctccgactaacctccctgtgcttgttgccttgctgctt
ctgtatggatgggcagtaattcccatgatgtaccctgcttcatctttcttcagtgtccct
agcactgcttatgttgcactgtcttgcattaatctctttgtggggatcaacagcagtgcc
ataacattcatcctggagttatttgaaaataacccgtctttgctgaagtttactaaaaca
ttgaaaaatctgctgattgtcttcccacatttttgcctgggccgtggactcattgacttg
gccatgaaccaagctgtgactgaagtatatgccaggtttggtgaagagcatgtttccaat
ccttttcagtgggactttgttggaaagaacctggttgccatggctattcaaggggttgca
ttcttcattctgaatctccttatgcaacaccatttgttctccacaagatggtttgctgag
actgccatgtcacctattattggtgaagatgaggatgtcgcagaagaaagaaaaagaatt
atgaatggaggaaacaaaacagatatcttagaattacgagaactgaccaagatttatgca
ggtagacacaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgcttt
ggtcttttgggagtgaatggcgctggcaaaacaacaacattcaaaatgctgactggagat
actgatgtgacatctggagatgctgtagtggccggcaatagtatattgactcacatttct
aatgtccatcaaaacatgggatactgccctcagtttgatgccattgatgacctgctcaca
ggacgagaacatctttacttatatgcacgcctgcgaggggttccagcagaggaaatcaag
agggttgctgaatggggcatccagaagctgggacttcctatgtatgcagaccacctggct
ggtacctacagtggtggcaacaagcgcaagctctccactgccattgcactgataggctgc
ccaccactcatcttgctagatgaaccgactactggaatggaccctcagtcccggcgcctc
ctgtgggactctattgtcagcgtgctcagagatgggcgagctgtggttctaacctcacac
agtatggaagaatgtgaagccctctgtactcgtttagccatcatggtaaaaggtaccttc
aaatgcctgggcacaattcagcagctaaaatacaagtttggagatggttacattgtcact
ctgaaaatcaaagctccaaagtctgggctgcctccagatcctactcctgctgagcaattc
atacgcatgaacttcccagggagtttacagagagagaaacactacaacatgctgcagtat
cagatttgctcctcctctctggctaaaatttttcagttaataatctccaataaggaaaac
ttgcatattgaagaatattctgtgtctcagacaactttagatcaggtttttgtgaacttt
gctaaacagcagatggaggatgaggaaattcctttgcatccccgtgcagctggagccaga
caagaagcaaaggtgtaccctgctttgcatcagcaggcagttgcatag
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integrated database retrieval system
