KEGG   Antrostomus carolinensis (chuck-will's-widow): 104521838
Entry
104521838         CDS       T08541                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:acar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acar03400]
    104521838 (HELQ)
Enzymes [BR:acar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     104521838 (HELQ)
DNA repair and recombination proteins [BR:acar03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    104521838 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f Cdd1
Other DBs
NCBI-GeneID: 104521838
NCBI-ProteinID: XP_028939840
LinkDB
Position
Unknown
AA seq 1002 aa
CSHDSEEDMFGDYDSFYGNDSLLSQVDDIEHKHLLDKNTDIKAADGVILESLQSVIQQKN
QDNFSNSENMVVLKADEEDAFHMNENDVVDSNQEPTESVLDDLPSSQLLYFEKMDKLSSG
SRTSLASERRNKCMNSSSDKIRSPSSLCPDAEHRNRPTDFSSDSKCDLFKTESLKDHLKS
AMTVNAKAQTVQVSKTKQLKEAVLSEEIFVARKTIETSSVDIGPFYGLPSKVKDLFKQFR
GIETLYEWQHDCLMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPYV
AIVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIET
DRIDDLGLVVVDELHMLGEGSRGATLEITLAKILYTSKNTQIIGMSATLNNVGDLQKFLQ
AEYYTNDFRPVELKEYVKIRDTIYAVDSKAENGFTFSRLLNFKYSSNLEKADPDHIIALV
TEVIPKYSCLIFCPTKKNCENVASMVCKYLKKEFRTHREKEKQDLIENLKNIGNGSVCPV
LKQTIPFGIAYHHSGLTNDERKSIEEAYSTGVLCLLACTATLAAGVNLPARRVILRAPYV
ANDFLKKNQYKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVSSPLENCYSNLLLELT
KGMQSLLLSLVGLKVAVTHEEVDNFMSGTLLGVQQQLLSKEKSLSEVIKDGLENLIEKGL
LKGRMSEKDHNSKCTLTITPLGRATYKGSIDLAYCNLLHRELKKGLEGLILESNLHLLYL
ATPYDMTSNCSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAIRKNVDSAVV
NRLYLSFVLYTLLKETDIWSVSEKFNMSRGYVQNLLNSAASFASCVLHFCEELEEFWVYK
ALLTELTKRLTYCVKAELIPLMEVAGVLEARAKQLYNVGYKTLAHLANANPETLVKMIGH
LSRRQAKQIVSSAKMLLSEKAEALQEEVEELLKVPPDIPQTY
NT seq 3009 nt   +upstreamnt  +downstreamnt
tgtagtcacgatagtgaggaagacatgtttggtgactatgacagcttttatggaaatgat
tctttgttgtctcaagttgatgatatagagcacaaacacctgctggataaaaatacagat
attaaagcagctgatggtgtcatacttgagagtctgcagtcagtaattcaacagaaaaac
caagataatttttctaattcagaaaatatggttgtccttaaagctgatgaagaggatgct
ttccacatgaatgaaaatgatgtggttgatagcaatcaagaaccgactgaatctgtttta
gatgacttgccatcatcacagcttttgtattttgagaaaatggataaactttcctctggt
tctagaacgtctctagcttcagaaaggagaaataaatgcatgaattcttcctcagacaaa
atcagaagtccatcatctctttgtcctgatgctgaacacaggaacagacccactgacttt
tcttcagactctaagtgtgatttatttaaaactgagagtcttaaagatcatctgaaaagt
gccatgactgtaaatgccaaagcccagactgtgcaggtctctaagaccaagcagcttaaa
gaagctgttttatctgaagagatttttgttgctaggaaaactattgaaacttcttctgtt
gatataggtcctttttatggattacctagcaaagttaaagatctattcaaacaatttcga
gggattgagacgctttatgaatggcagcatgattgcttgatgctagaatctctgcagcaa
agaaagaatttaatatactcattgccaaccagtggtggaaaaacacttgtagctgaaata
ataattttgcaagaattactgtgcagacagaaagatgttctgatgattctgccgtatgtt
gccattgtccaagaaaaggttaggggcttatcaagttttgggatagaattgggtttcctg
gttgaagaatatgcaggaagtaaaggaagatttccaccaatcaagagaagaataaaaaag
tctctttatattgctactatagaaaaaggacatgctctagtgaattccttaattgaaaca
gacagaattgatgaccttggtttggttgtagtagatgagttgcacatgcttggtgaggga
agtcgtggagccacactggaaattactcttgcgaaaattctttacactagtaaaaacacg
caaatcattggaatgagtgcaactttaaataatgttggagacttgcagaagttcctgcaa
gcggagtattatactaatgattttagaccggtggaattgaaggagtacgtaaagatacga
gataccatttatgcagttgacagcaaagcagaaaatggctttactttttcacgtctcctt
aatttcaagtattctagtaatctggagaaagcagatcctgaccacatcattgcactggtt
actgaagttattcctaagtattcctgcctaatcttttgtcccactaaaaagaactgtgaa
aatgtggcttcaatggtgtgcaagtacctcaagaaagaatttagaactcacagggagaaa
gagaaacaagatctcatcgagaacctaaagaacattggaaatggaagtgtctgtcctgtt
ctgaagcaaacaatcccttttggtattgcctatcaccatagtggccttacaaatgatgaa
aggaaaagtatagaggaagcatattctacaggtgtcctttgtctgcttgcttgcacagct
accttagctgctggagtcaacctgccagctagaagggttattctaagagctccttatgtt
gctaatgacttcctgaagaagaaccagtacaaacaaatgattggcagagctggtcgagct
ggtattgacagtgctggagaaagtattctcatagtgcaagaaaaagacaaacacttggtt
caggatttagtcagcagtcctttggagaattgttacagcaatcttctactggagttgacc
aagggaatgcagagcctgttgttatctttggttggactgaaggtagcagttacccatgag
gaagtcgacaattttatgtctgggacattgctgggtgttcagcagcagctgctgtctaaa
gagaagagcctctcggaggtaattaaagatgggctagaaaatctaatagaaaaaggactt
ctgaaaggaagaatgtctgagaaggaccacaattccaaatgtacactcacaatcacacca
ttgggtagagctacttataaagggtctatagacttggcatactgcaatcttcttcacaga
gaactgaagaaaggtttggaagggctgattcttgagagcaatcttcatcttctgtatctg
gcaactccatacgatatgacttccaactgtagcccagattggatgatatacttgagacag
ttcaatcagctaagtgcagcagagcaaaaagtagcggatattgtgggagtacccgaaagc
ttcattacgaaaaaggcttctggtcaagccatcagaaagaatgtggacagtgctgtggta
aacaggctctacctgtcgtttgtcctttataccctactgaaagagaccgatatatggagt
gtttcagagaaatttaatatgtcccgaggatatgtgcaaaatctccttaattctgctgcc
tcttttgcctcctgtgttctgcatttctgtgaggaattggaagaattctgggtttataaa
gccttgctgacagaacttaccaagcggttgacatactgtgtcaaggcagaactcatccct
ctgatggaggtagcaggggttctagaggcacgagcaaaacagctttataatgtggggtac
aaaactttagcacacttggctaatgcaaatccagaaactctggtcaagatgatcgggcac
ttgtcacgacgtcaagccaagcagattgtttcatctgcaaagatgctgctgagtgaaaaa
gctgaggctttacaagaagaagttgaagaactcttaaaggtgcctccagatatcccacag
acctactga

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