Antrostomus carolinensis (chuck-will's-widow): 104522044
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Entry
104522044 CDS
T08541
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03440
Homologous recombination
acar03450
Non-homologous end-joining
acar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104522044 (RAD50)
03450 Non-homologous end-joining
104522044 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104522044 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acar03032
]
104522044 (RAD50)
03400 DNA repair and recombination proteins [BR:
acar03400
]
104522044 (RAD50)
DNA replication proteins [BR:
acar03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104522044 (RAD50)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104522044 (RAD50)
BRCA1-C complex
104522044 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104522044 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
DUF2703
NPV_P10
ABC_tran
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
104522044
NCBI-ProteinID:
XP_010162519
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDINGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDRVMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSGKVKECQTELKYLKENKEKAQEIQDNLNNTEAQLAASKEN
VKSIVSQLEPLKSSLAEVEQNLVKVMRLDNDVKALESRKRQMEKDNQDLQQKMEQVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRATKECQRFNSEKSDLLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFNERHIASFHRLLKERQERDAEAANHLMREFER
KEAMKQKQIDDIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQELEGFSDRILELDQE
LVKTEHELEKAERNSNVEALELEVQTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHDKNRQINQTRDNLADLNKR
LASVEYHRTYVSNELKKKEAQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRKTVVELQDRDIPDLKNKIQNANRDLTGLKNEIEQQESVLQTALS
KEEGAKACLQDITLMERYQTDIRDVERKIAQQEAKLLGFDLSRTVLQVSQEKQEKKHLWD
TVTGKIELNQKFKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCRDIKEAKEQVFPLDATLEKLQQEKVDLMNKRTTSHKETQEKINGIKEKVKDINKYVKE
IENYIQQGKDDYKKQKESELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKRLVKEMGDMKVPQMKNEQKQLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIDYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtatcctcggcgtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccattaactattttggtgggaccgaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggagattttcctcctggc
accaaaggaaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
caaatccgattacagttccgagatataaacggagagctcgtagctgtccagcgatccatg
gtctgtacccaaaaaggcaagaaaacagaattcaaaacactcgaaagtgtcattactaga
acaaagcatggtgagaaggtcagcctgagttccaagtgtgcagaaatcgatcgagtgatg
atcagcgcccttggcgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccactaagtgaagggaaggccctgaaacaaaaatttgatgagatcttc
tcagcaacaaggtatattaaagcacttgaaactctccgtcaggtacgactgaaacaaagc
gggaaagtaaaagagtgtcagacagaactgaaatatctaaaagagaataaagaaaaagca
caggaaatccaggataatcttaacaatacagaggctcaactggctgcttctaaggagaat
gtaaaatcgattgtgagtcaacttgagcctctgaagagttctctggcagaagttgaacag
aatctcgtaaaagtcatgaggctagacaatgacgtaaaagctctggagagcaggaagagg
cagatggagaaagataatcaagatttgcaacagaagatggaacaggtttttcaaggaaca
gatgaacaactaagggatcgataccagaaccaccagagaacggtgaaggagaaggagaag
agattatcagactgcaagcgtgaattagacagagcaactaaagaatgccagagatttaac
agtgagaaatcagacctacttattgaacgaggtcgtcttcagctgcaagcagatcgtcac
caggaacacatcacaacgagggattcgttgattcagtccttggcagcacagctggaatta
gatggttttgagcgagcaccttttaacgaacggcacattgccagttttcacaggttgctg
aaggagaggcaggaaagagacgcagaagctgcaaatcatttaatgagagaatttgaacga
aaagaagcgatgaaacagaaacagatagatgatataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgagctgaagaatgta
aaatatgaattgcaggagttggaggggttttcagacagaattctggagttggatcaggag
cttgtcaagacagaacatgagctggagaaagctgagagaaacagcaacgtagaagcactg
gaactggaagtacaaactctgcaaaatgagaaaataaacctggacaaagctcttcggaag
ctggatcaagagatggagcagttgaatctacataccacgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtaaaatcgagacattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catgataaaaatagacagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcggtagagtatcacagaacttacgtcagtaatgagctgaagaagaaagaagcg
cagttgtccctccatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaactgcaagatgaaattgaaaaaagttccaaacagcgagcggtgcttgct
ggagccactgcagtttattcccagttcattacacaactgacagaggagaaccagtcgtgt
tgtccagtttgtcagagagtttttcagacagaggctgagctgcaagatgtcattagtgac
ctgcagtccaagctgcgccttgcaccagacaaactgaagtcaacagagtctgagcttaaa
aggaaagagaagaaacgtgatgaaatgatgagtcttaaaccactcaggaaaactgtagtt
gaactccaagacagagacataccagacttgaagaacaagatacagaatgcaaacagggat
ttaacaggcctgaagaatgagatagaacaacaggaatcggtcttgcaaacagctctgtct
aaggaggaaggtgccaaggcatgcttacaggatataacactgatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggcttcgat
ttaagtagaactgttctacaagtgagccaagaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaattcaagcaagaccagcaaaatcagatt
cagcagctgaagagtacagttaacgagctgaaagctgagaaacttcagatttccagcagc
atgcagcgtcgtcggcagctggaggagcaaacagtggaactgaccactgaggttcagtcc
ctgtgcagagacatcaaggaagcaaaagaacaggtatttcctttggatgcaactttagaa
aaactgcagcaggagaaggtggatctaatgaataaaaggactacaagtcataaggaaaca
caagagaagataaatggcataaaagagaaagttaaggatataaacaagtacgtgaaagaa
attgaaaactatattcaacagggaaaagacgactataaaaagcaaaaggagtctgaactt
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaagag
atggaaatgattcggcaagatatcgacactcaaaagatacaggagaggtggctggaggat
aatctgactttgaggaaacgaaatgaggagctaaaagaagttgaagacaatataaaacgc
cttgtgaaggagatgggagatatgaaagtcccccaaatgaaaaatgaacaaaaacaatta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgccctcggccgacaacgtggg
tttgaggaagagattgttcggtttaaaaaggagcttcgagagtcacagttcaaagatgca
gaggagaaatacagggagatgatgattgtgatgagaacaacagagctggtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcacagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gattatatagaaattcgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagacacagcgctggatatgcgagggaga
tgcagtgctggccaaaaggtgctcgcttctcttattattcgtcttgctctagcagaaaca
ttctgtcttaactgtggcatattggcactggatgagcctactaccaatcttgatcgagaa
aacattgagtctctggcacatgccctggtggagataataaaaagccgctcccagcagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacgttctacaggataaagaagaacatcgaccagtgctctgagatcatg
aaatgcagtgtcagctccctgggctcctatgttcattaa
DBGET
integrated database retrieval system
