Antrostomus carolinensis (chuck-will's-widow): 104522166
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Entry
104522166 CDS
T08541
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acar03036
]
104522166 (CHD2)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104522166 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
104522166
NCBI-ProteinID:
XP_010162689
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSRSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRGQKQMKKTNKWKREVSGEEEDEDGGEQGTSGESEPEPKKVKSRRPPQR
RTMAKTSVKKPHKPQRGKKRKRPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGATGASTTVYATEANGNPSADFDPEK
DEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGMKKLENFKKKEEEIKQWLGKVSPEDV
EYFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKSSSNDPEYLCKWMGLP
YAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGEN
LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVP
LSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLK
DKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEM
SALQKQYYKWILTRNYKALSKGARGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGIE
TLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSI
KGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSN
PFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQF
KVANFATMEDEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKA
QTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFI
KAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEHEEQLKENPGEGK
GPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVD
WGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKL
LKKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKE
DGLDKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKKTKDKKEKPKSGEAKSGSKGKR
SQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLE
HTRNCLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRS
QEEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHLPPSHAQQQMHGH
PRDNYGHPNKRHFSNTDRGEWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRS
RGDPHRSSGNYRPNNLSRKRPYDQYNSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQ
QDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKSGDYKQPLPPPHPAVSDPRSPSSQKSPHD
SKSPLDHRSPLDRSLEQKNNPDYNWNIRKT
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcgctcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagcgag
cagggcagcgagtcaaacagcagctccgagtcctctgaaagtcagtctgaatccgaaagt
gaatcaacgggttcaaaatcccagcagacccctcctgaaaccaaagaaaaaccggcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcgcgatttaatataaaagatgaggca
agtagcgaatctgaaaatgagagcccaaaaagaagaggccagaagcaaatgaaaaaaacc
aataaatggaaaagagaggtctctggtgaagaagaggatgaagatggaggggagcaaggc
accagtggagagagtgagcctgaaccaaagaaagttaaatcaagaagacctccccaaagg
agaacaatggccaaaaccagtgttaaaaagcctcacaaaccccagcgtgggaagaagcga
aagagaccagactcatctgaagatgatgatgatgacgaagatgatgagacccccaagaga
caaactcgacgaagagcagccaaaaatgtcagttacaaagaagatgatgattttgagacg
gattctgatgacctgatagagatgactggggaaggagctgatgaacaacaggacaacagc
gaaactattgagaaagtcttggacatcagacttggaaaaaaaggagccactggtgcttcc
acaacagtgtatgcaactgaagccaatggcaacccaagtgctgactttgatcctgaaaag
gatgagggagaagtgcagtacctgatcaaatggaaaggctggtcatacattcatagcaca
tgggagagtgaagagtccctgcagcagcagaaagtgaagggcatgaaaaagctagaaaac
ttcaagaaaaaagaggaggagatcaagcaatggctgggcaaggtgtcacctgaagatgtg
gagtatttcaactgccaacaagagctagcttcagagctgaacaaacagtatcaaatagtg
gagagagtaattgctgtgaagaccagcaagtctgcaacgggacattcagatttcccagca
aatagtcgcaaatcatcctcgaatgaccccgaatacctgtgtaagtggatggggctgccc
tatgccgagtgcagctgggaagatgaggctctgataagcaagaaatttcagcactgcatt
gacagcttcaacaatcgtaacaactccaaaaccattcctacccgggactgcaaggtattg
aagcagagaccgaggttcgttgccttgaagaaacagccttcttacattggtggtgagaac
ctggagctgcgagattaccagctggagggcctcaactggcttgctcactcgtggtgcaag
agcaacagcgtgatcctggctgatgaaatgggcctgggcaagacaattcagacaatatca
ttcttgtcgtatctcttccatcagcaccagctctatggccctttcctagtggtcgtgccc
ttgtccactctcacctcatggcagagagagtttgaagtgtgggcacctgagataaacgtg
gtggtttacattggagacctcatgagcaggaacatgatacgtgaatatgagtggatccac
tctcagtctaaaaggttgaagttcaatgcacttatcacaacatacgagatcctcctcaag
gataaggctgttttgggaagtattaactgggcctttctaggcgtggatgaagcccatcgg
ttgaaaaatgatgactccttgctatacaaaacattgattgatttcaagtccaaccacagg
ctgctgatcaccggcaccccgcttcaaaattcactcaaagagctctggtccctgctgcat
ttcattatgccagagaagtttgagttctgggaggattttgaagaggatcatgggaaaggt
agagagaatggctaccagagccttcacaaagtcctggagccatttctcctacgcagagtg
aagaaggatgtggagaaatctttgccagccaaagtggagcagatccttcgggtggaaatg
tctgctttgcagaagcagtattacaagtggattttgacaagaaactacaaagctctttca
aagggagcaagggggagcacatctggtttcctgaacattgtgatggagttgaaaaagtgc
tgcaaccactgctaccttatcaaacctcccgaggaaaatgagagagaaaatggcattgag
accctgcagtctctgatcaggagcagtggaaagctaattctcttggacaagctgctgacc
aggctgcgggagagaggcaacagagtgctgatcttctcccagatggtgaggatgctggac
atcttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcaatc
aaaggggagatccgaaagcaggcgctggatcacttcaacgctgacggctctgaggacttc
tgtttcttgttgtcaacacgagctggagggctgggaattaatttagcctctgctgatact
gttgttatctttgactctgactggaacccccaaaatgatcttcaagctcaggctcgagct
caccggattggacaaaagaagcaggtgaatatttaccgcctggttacaaagggtacggta
gaggaggagatcattgagagggccaagaagaaaatggtgctggatcatttggtgatccag
cgtatggacaccactggacggactgttctggacaacaactctgggagatctaactcaaac
cccttcaacaaagaggagctgacagctattctgaagtttggagctgaagacctcttcaag
gagcttgaaggggaagagtcagagcctcaggagatggacatcgatgagattttgcgtctg
gctgaaacacgagagaatgaagtgtccaccagtgccactgatgagctcctctcccagttc
aaggtggccaactttgcaaccatggaggatgaagagacagagctggacgagcggtcccag
aaggactgggacgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaagg
cagaaagaattagaggaaatctacatgctgcctcgaatccggagctcgactaaaaaggct
cagacaaatgacagtgaatcagatgcagaaactaagagaaggcttcagagatcatctgga
tcagaaagtgagactgatgataccgatgacgagaagagaccaaagcgcagggggcgtcct
cgaagtgttagaaaagatactgtggaaggatttactgatgctgaaatcaggaggtttatc
aaggcttataagaagtttggactgcctcttgaacggctggagtgtattgcccgggatgct
gagctggtggataagtctgtggctgatctgaaacgattaggggaactcatccacaatagc
tgtgtttcagcaatgcaagagcacgaggaacaactgaaagaaaatccaggtgaagggaaa
ggacctggaaaaagaagaggtcctactatcaagatttccggtgtccaagtcaatgtgaaa
tccatcatccagcatgaagaggagtttgaaatgctgcacaaatccattccctcagaccca
gaggaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgcccattttgatgtagac
tggggagtggaggaggattctcgcttgctcgtgggaatttacgagcatggttatggaaac
tgggagctaattaaaacagatccagaactgaagttatctgataagatcctacctgttgag
acagataagaaacctcagggaaaacagctccagactcgagttgattatctactgaaacta
ctgaagaaagatctggacaagaaagaaaacatgaaagatggagaggagggcaagctaaag
aagaggaaaccacgagtaaagaaagagaacaaggctcccaaagtcaaagatgagcatggg
aatgaactttcctctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggag
gatggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaac
aaggaaaaacagacgtcaactaagaaagaaaaggaaagtgataaagagaaaaagaagaca
aaggacaagaaagagaagcctaaaagtggtgaagccaaatctggaagtaaagggaagaga
tctcaaggtcccgtccacattaccgcagggagtgaaccgatccccattggagaagatgag
gacgacgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtcaaa
aaagcactgaagcaacttgataagcctgataagggactaacggttcaagagcagctggag
cacacacgcaactgcctcctaaaaattggggaccgtatctctgagtgccttaaagcctac
actgaccaggatcatatcaaactatggagaaggaatctatggatatttgtgtcaaaattc
acagaatttgatgccagaaaactgcacaaactctacaagatggctcataagaaaagatcg
caggaagaggaggagcagaagaagaaggaggacatgtccagcatgaagaagccgttccgc
ccagagccttcaggctccagccgtgattctgtgatgtcccaatctcacgtgcctcacaat
cctcattcccagaaaatccacctgcccccttcccacgcccagcagcagatgcacgggcac
ccccgtgacaactatggccatccaaacaagagacatttcagcaacacagaccgaggagaa
tggcagagggatcgaaagttcaactacggtggcaacagcaaccagatgtggggtggggag
cggcatcaccagtatgagcagcactggtacaaggaccaccactatggggacagacgatct
cgtggagacccccaccggagctctgggaactacagaccaaataatctttcccgcaagagg
ccatatgatcagtacaacagtgaccgagaccacagaggccaccgagattattatgacagg
caccaccacgattccaagcgtcgacgatccgatgagttcaggcctcagaactaccaccag
caggatttccgacggatgtctgatcacaggccacccatgggataccatggccaaggacct
tcggaccactaccggtccttccacacagacaaatcaggagattacaaacagcctctccct
ccacctcaccctgcagtgtcggaccctcgctcaccctcctctcagaaatcccctcacgat
tccaagtcacctctcgatcacaggtcacctctggataggtcgttagaacagaagaacaat
ccagattataactggaacattcggaaaacataa
DBGET
integrated database retrieval system
