Antrostomus carolinensis (chuck-will's-widow): 104522210
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Entry
104522210 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-1
KO
K16498
protocadherin delta 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104522210
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acar01009
]
104522210
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acar04515
]
104522210
Protein phosphatases and associated proteins [BR:
acar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104522210
Cell adhesion molecules [BR:
acar04515
]
Cadherins
Protocadherins
104522210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
K319L-like_PKD
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
104522210
NCBI-ProteinID:
XP_010162738
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MPRIEPIYAFPAGLNISSRFLDNMVLDPSSSHRAELMEPWVLAGQGRRVKQGFRTIVSSR
DRDVFSPVEGELLSSVTNEALVCGEVEGWRHCELLACRKYQGGQCRMFHLLSICTMPAPL
QRRMKPLASCLGLWLLFQLPALVSGTRVVYKVQEEQPPNTLIGSLASDYGFPDVGHLYKL
EVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLILNSSPRLL
EGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELLAGPE
AQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILD
MNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRL
DRATGLITVQGPIDREDVNILKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGI
GLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDS
KKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTE
VAFPENNEPDDLVIEVSASDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDR
EQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVG
MVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGD
PPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAEL
TYSITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYV
NETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVV
LVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGL
QKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQV
VQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDP
SQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPD
VAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRL
SEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSSQTTKREIY
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggattgagcccatctatgccttccctgctggactgaacatcagcagccgcttt
ttggacaatatggtccttgatcccagctcctcgcacagagcagagctgatggagccgtgg
gtgcttgcaggacaagggagaagagtcaagcaaggctttaggaccatagtttcatcgaga
gacagagatgtattttcacctgtggagggagagctcctttcttctgtgaccaatgaagca
cttgtctgtggggaagtggaggggtggaggcactgcgagctgctggcttgcaggaagtac
cagggtggacagtgcaggatgttccacttgttgagcatctgcacgatgccagctcccctg
cagcgcaggatgaaaccgctggcatcctgcctgggcctgtggctcctcttccagctccct
gccctggtctctgggacgcgtgtggtctacaaagtgcaggaggaacagccccccaacacc
ctcatagggagcctggcctctgattatggcttcccagacgtggggcacctctacaagctg
gaagtgggggccccatacctacgtgtggatggcaagactggggacatctacaccacagag
acctccatcgaccgggagagcttgcgtgagtgccagcacctcctgcctggagaaccctgc
ttcctggagtttgaagtgtccatcactgacctgatcttgaacagcagcccacgcctgctt
gaggggcagatagaggtgctcgatatcaatgacaacacccccaactttgcctcacctgtt
ctcaccctctccattcccgaaaacaccaacatcgggacactcttccccatccccctggcc
atggaccgggactcaggtcccaatggcgttgcctcctatgagctgctggctggtccagag
gcacaggagctctttgggctgcaggtggcagaggatcaggatgagaagcagccacagctg
attgtcatggggaacctggaccgggagcagtgggactcctatgatctgaccatcaaggtg
caggacggaggcaacccaccgcgggcgagcagtgccctgcttcgcatcaccatcctggac
atgaacgacaatgcacccaagttcgagaaggccctgtacgaggcggagctctctgaaaac
agccctgtggggcactctgtcctccaggtgaaagccaatgactcggatcagggcgccaac
gccgaaatcgactactccttccaccaagcctcagacatggtgcgccggctgctgcgcctg
gaccgcgccacggggctcatcaccgtgcaggggcccatcgaccgtgaggatgtcaacatc
ctcaagttctccgtcatggctaaggacaaaggggccaaccccaagagcgcccgaacccag
gtggtggtcaccatcaaggacatgaatgacaacgctccctccatagagatccggggcatt
gggctcgtgacccaccaggatggcatggcgaacatttcggaggacgtgccagtagagaca
gcagtggctctggtacaagtgtccgaccgagatgagggtgaaaacgccgtggtgacttgt
gtggtggctggtgatgtcccgttccagctgcggcaggcgagtgagacagggagtgacagc
aagaagaaatacttcctacagaccactacgccgctggactatgagtcagtgaaggagtac
actattgagattgtggcggtggactcggggaacccgcccctctccagcaccaactctttg
aaggtgcaggtggtggacgtgaatgacaatgcgcctgtcttcagccagagcttcaccgag
gtggccttccccgaaaacaatgagcctgatgacctggtgattgaggtgagcgccagtgac
gctgacagtggctccaatgccaagctggtttactccctggtgacggacccctcctccaag
ggctccttcaccattgaccctgactccggggagatccgggtcaaggcagtgctggatcga
gagcagcgagagcgctacgagttcttggtagtggcagcagacaagggcagccccagtctc
aagggcacagcgtctgtggccatcaatgtcatggacaggaatgacaatgaccctaagttc
atgctgagcggctacaacttctcagtgatggagaacatgccgcccctcagccctgtgggc
atggtgacggtgatcgatgctgacaaaggagaaaacgcccgcatccagctgtcggtggag
caagacaatggtgattttgtcatccagaatggcactggcaccatcctctccagcatctct
tttgaccgggagcagcagagcacctacactttccgactcaaggcagtggatggtggggat
cctcccaggtctgcctatgtgggggtgaccatcaacgtcttggacgagaacgataatgcc
cccttcatcacttcaccctccaatgccacctacaaacacatcctgccccacaccagccct
ggtcagcaggtgagcaaggtcaaggcagaggacattgactctggcatcaatgcggagctg
acctacagcatcacaggaggcaacccctttgagctcttccagatctccccgcacagtgga
gacatcaccctggagaaggagatcctgcgcaagcaccatggcctgcaccgcttggtagtg
cgtgtcaacgacaagggcaagccctcgcggcatggcacggcgctggtgcacttctacgtc
aatgagacgctggccaaccgcacgctgctggacacgctggtggggcacagcctggacaca
ccacttgacatagacatcgctggagaccctgaatacgagcgcagcaagcagcgaagcaac
atcctctttggagtcattgctggcatcgtggccgtcaccctggtcatcgtgctggttgtc
ctggtgcgctactgccggcagcgggaggccaagagcggctaccaggcaggaaagaaggag
accaaggacctgtatgcacccaagcaggccagcaagagtggtaagagcaagaacaaagtg
aagaagagcaagtctccgaagccacccaagcccacagaggatgaggaggagacagggctg
cagaaatcactcaagttcaacctcatgaatgactctgtcagcgacagcccccgaatccac
ctgcccctcaactaccctccgggcagtccagacctgggtcgccactaccgctccaactcg
ccactgccctccatccagctgcagcctcagtcaccttctgcctccaagaagcaccaagtg
gtgcaggacctgccggccaccaacacctttgttggcaccggggacaacaactcgacgggc
tctgagcagtactcggactacagctaccgcaccaatccccagaaatacaccaacaagcag
ttacctcatcgccgagtgacgttctctgcagccagccaggctcaggacctgcaggatccc
tcccagcacagctactacgacagtgggctggaggaatcagagaccccaagcagcaaatca
tcgtcggggccccgcatagggccactagccctgcctgaagatcactacgaacgcaccacg
cccgatggcagcattggggagatggagcaccctgagaatgatctccggcctctgcccgat
gtagccatgactgggacctgtacccgggagtgcacagagtttggccactccgatacctgc
tggatgcccggccagtcctcccccagccgcaggcccaagaacgccctcaaactctccact
tttgtgccttaccaagacagagggagtcaagagcaagtcgggaatggcagccccagactc
tcagaagagcgcagcaccaaaatggccaacctccgcctgctccccacatacagtgccttc
tccaatagtagccatgagccctgcaaggactctcctatggaggaaattcctctcacccag
acctcggacttccagccagccaccactccctcatcccagaccaccaagagggagatatac
ctgtga
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integrated database retrieval system
