Antrostomus carolinensis (chuck-will's-widow): 104523254
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Entry
104523254 CDS
T08541
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acar04040
]
104523254
Ion channels [BR:
acar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104523254
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
104523254
NCBI-ProteinID:
XP_028940272
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
RYTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSVIVMAYVGAFSNLGSVSVLRT
FRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFCLSVFALIGLQLFKGNLRYKC
MRNSTEFSTISHLLNKTWESYEMFANDTAYFAKKKGTSDILLCGPGAGTCPLGYTCSKIG
PNPDYGFTSFDTFGWAFLSLFRLMTQDYWERLYQQTLRASGKVYMLFFMLVIFLGSFYLV
NLILAVVTMAYEDQNKATIAETEAKERKFRETMELLQKEQESLGIKGIDILSLSSFEASS
LSTKEIKERSNRKKRNKSLGIEDNEEEQKFPKSQSTDSQRKLSFRGLAYGPHVNQGKRRL
SHGSVFNFQIPALEVDSRTDLGDEETRSAGEYEIQCRSLSVTQMGRPSSVQIQTSHSSHP
ATPNCVQSSKWANADDCNGVVLMTGGGSSRVHSLDLVSSEGVMLTPVIEDPGKGDLVTVN
DESSIMHLPPHLSVEYFNEALQRQRAASAVSIITSVLEELEESQQRCPQCLNDLALKYLI
WECCPLWLRIKKKVAAFIKDPFIDLAITVCIVMNTLFMALEHNNMSENFKWMLNVGNLVF
TGIFTAEMILKIIALDPYYYFQKPWNIFDSVIVTLSLIELSLPRHKSKKERRKGGTLTVL
RSFRLLRVFKLAKSWPTLNTLIKIIGNSLGALSNLTLVLAIIIFIFAIVGVQLFGRSYGE
NSHKITKNGKPRWHMMDFFHSFLVVFRILCGEWIETMWDCMVVAEQPLCLLVFLLVMVIG
NLVVLNLFIALLLNSFSTDCLQTAEDDREVNNLRIAFARIHKGFHFVKSIVWDTCFGKLR
HIKKAHRKKNKSTAQNQLGFKSEEIKNCKENYKNECAEKNGAKCSGPEDFITNPNVFVCV
PIAEAENTSECFEDDDKLSTFTDTEYSKQFDSISSSEGSTVDLTNPEDLLRQIPEFSEDF
KTPEKCFPEGCVQYFRCCVGSAIKFGGEKWWNLRKTCYQIVEHSWFESFIIFMILLSSGA
LAFEDIYLNERKNIKIMLAFLDKMFTFIFVLEMLLKWVAYGFKKYFTNVWCWLDFFIVDV
SLINLFGSSFGPMKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWL
IFSIMGVNLFAGKFGKCVNLTEEDSELNNSINNISDCRMCNNTGKIFWVNVKVNFDNVGS
GYLALLQVATFKGWMDIMYAAVDSREKNEQPQMEHNLFMYLYFVSFIIFGSFFTLNLFVG
VIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRFQGFLFDIVTR
QAFDVVIMILICLNMISMMVETYEQSETKSNILNKINMLFVALFTTECVLKLVALRQYYF
SNAWNIFDLVVVIMSLVALLLSGIGKAFEHFLPPTLFRVIRLARIGRILRLIRAARGIRT
LLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKMEDGIDDMFNFQTFPNSMLCLF
QITTSAGWDGLLSPILNTGPPYCDPNITGIIGECGKPAIGIMYFVSYIIISFLIVVNMYI
AVILENFNAATEESTEPLGEDDFDIFYEIWEKFDPEATQFITFSALSDFADALAEPLRVP
KPNKVELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGVLDTLKVQMEEKFMDANQSKKS
YEPISTTLRHRQEEASATVIQRAYRSHLLMRSVKQASYLYQHRTCSGDTLGSDAPEKEGL
IASMMGENYGKSPDKSETLSSASFPPSYDSVTRDSSGNLMVENGEITGNHQSADIK
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
agatacactttcactggcatttacacttttgaatcattgataaaaatcttggcaagagga
ttctgtctaaatgaattcactttccttcgagatccctggaactggttggatttcagtgtt
attgttatggcgtatgtgggagcatttagtaacttagggagtgtgtcagtccttcggact
ttcagggttctgagagctttaaaaaccatttcagtagtcccaggactcaagatcattgta
ggggcgcttatccagtctgttaagaaacttgccaatgtgatgatcctgactgttttctgc
ctgagtgtctttgccctcataggcctccagctttttaagggcaatctaagatacaagtgt
atgaggaactctacagagttcagtacaatatctcatcttcttaacaaaacatgggaatcc
tatgaaatgtttgctaatgatacagcatactttgctaagaaaaagggcacctcagatatt
ttgctatgtggtcctggtgctgggacctgtcctctgggctatacatgctcgaaaattggg
ccaaatcctgattatggtttcactagttttgatacgtttggctgggcttttctttcctta
ttccgcttgatgacccaggactactgggagcgtctgtaccagcagacccttagagcttct
gggaaggtgtatatgctcttcttcatgctggtcatctttctgggctcattttatctagtc
aacttgattctggctgtagtaacaatggcatatgaagaccagaacaaggctaccattgct
gaaacagaggcaaaggaaaggaaattcagggaaaccatggaattattacaaaaggagcag
gagtcattgggtattaaaggaatcgatatcctgtcacttagttcctttgaagcctcttct
ctgtctaccaaagaaatcaaagaaagaagcaataggaaaaagagaaataagtccttgggg
atagaagataatgaagaagaacaaaaattccccaagtcacagtccacagacagtcaacga
aagttgtctttccgtggtttagcatatggtccccacgtaaatcaggggaaacgcagactt
agccatgggagcgtgttcaatttccaaatacctgctttagaagttgattccagaacagat
cttggtgatgaggagacccgcagtgctggggaatatgaaatccagtgtcggtcactgtca
gtcacacagatgggaagaccctccagtgtgcaaattcaaacgagccacagctctcaccct
gctaccccaaactgcgtgcagagcagcaagtgggctaatgcggatgactgcaatggggtg
gttttgatgacgggaggaggaagcagcagggtgcacagtctagatctggtgtcttctgaa
ggagtaatgcttacacccgtaatagaagacccaggaaagggtgacctggtaactgtaaat
gatgagagcagcatcatgcatttgcctcctcatctgtcagtggagtactttaatgaggca
cttcagagacaaagggcagcaagtgcagtcagtataattaccagtgtcttggaggaactt
gaagaatctcagcagagatgcccacagtgcctgaatgatcttgctttgaagtatctaatt
tgggaatgttgtccactttggttgagaatcaagaaaaaagtggctgctttcataaaggat
ccttttattgatctcgccatcactgtttgcattgtgatgaacactttgttcatggcactg
gagcacaataatatgtcagaaaattttaagtggatgcttaatgtaggcaacttggttttt
acaggaatcttcactgcagaaatgatcttaaaaatcattgctctagatccctattattat
tttcagaagccctggaatatttttgacagtgtaattgtcacattgagtttaattgaactg
agtttgcccagacacaaaagcaagaaagaaaggcgaaaaggaggaacgctgacagtttta
cgatctttcagactgctgagggtcttcaaactggcaaagtcctggccaactttaaacact
ctaattaaaataattggtaactccctgggagcactgagcaatctgacccttgtcctggca
atcatcattttcatttttgctatagtaggggtgcaactttttgggagaagctatggggag
aacagccataaaataaccaaaaatggcaagccacgctggcacatgatggacttcttccac
tcattcctcgtcgttttccgaattctgtgtggagaatggattgagaccatgtgggactgc
atggtggttgctgaacaaccactttgccttcttgtctttctgctggtcatggtgatagga
aatttagtggttctcaaccttttcattgcactactactgaattccttcagtaccgactgt
ctccagacagcagaggatgacagagaggtgaacaatcttcggattgcttttgctcggatt
cacaagggatttcactttgtgaagagcattgtgtgggatacctgttttggaaagctcagg
catataaagaaagcacacaggaagaaaaataaatcgactgcgcagaaccaacttgggttc
aagagtgaagagataaaaaattgtaaagagaattacaaaaatgaatgtgctgagaaaaat
ggggccaaatgctcaggtcctgaagattttattaccaatcccaatgtatttgtttgtgtc
cctattgctgaggcagagaatacaagtgagtgttttgaagatgatgataagctgagcaca
tttacagacacagaatacagcaaacagtttgacagcatcagctcttctgaaggtagcaca
gtggatctgacaaaccctgaagatcttttgaggcagattcctgagttttctgaagacttc
aagactccagaaaaatgttttccagaaggttgtgttcaatacttccgttgttgtgttggt
agtgccatcaagtttggaggagaaaaatggtggaatctgagaaaaacctgctaccagatt
gttgaacactcctggtttgaatcctttattatattcatgattcttctgagcagtggagcc
ctggcatttgaagatatctatttaaatgagagaaaaaacattaaaattatgttggcattt
cttgacaaaatgttcactttcatctttgttctggagatgctcctgaaatgggtggcttat
ggcttcaagaagtatttcaccaatgtctggtgctggctggacttctttattgtagacgtc
tctttaataaacctgtttggcagttcatttggacctatgaaatctctgaggactctccga
gctctgagacccttaagagcgttgtcacgatttgaggggatgagggtggttgttaatgcc
ctcattggagccatcccttccatcatgaatgttctgcttgtctgcctcatcttctggctc
atctttagcatcatgggagtgaacctctttgctgggaagtttgggaaatgtgtcaatctg
acagaagaagattcagaactaaataattcgatcaataacatatcagactgtagaatgtgt
aataacacaggaaaaatattttgggtcaatgttaaagtcaactttgacaatgtgggctct
ggctacctggctcttcttcaggtggcaacatttaaaggttggatggacatcatgtatgca
gctgtagattcacgagagaaaaatgagcagccgcaaatggaacacaatctatttatgtat
ctctattttgtgagcttcataatctttggatctttctttaccctgaatctctttgttggt
gttattattgacaacttcaaccaacaaaagaaaaagataagtggggaagatatctttatg
acagaagaacagaaaaaatactacaatgcaatgaaaaagttgggatccaagaaacctcaa
aaacccattccaagaccactgaacagattccaagggttcctttttgatattgtaacacgt
caagcctttgatgttgtcatcatgattctcatctgccttaacatgatcagtatgatggtg
gaaacctatgagcaaagtgaaacgaagtctaacatcctcaacaaaatcaacatgctattc
gttgctctctttactacagaatgtgtactgaagttggtggctctgaggcagtactatttc
tcaaatgcgtggaacatatttgatttagttgttgtgatcatgtcacttgttgctttactg
ctttctggcatcggtaaagcatttgaacatttcttaccacctacactcttcagggtcatt
cgtttggctcgaattggacgaatactgagactcattcgggctgccagaggaattcgaact
ctgctttttgcattaatgatgtctctacctgctctatttaacattggcctcttgcttttt
ctggtcatgttcatttatgctatttttggtatggctaactttgcctatgtgaagatggaa
gatggcattgatgacatgttcaacttccaaacctttcctaacagcatgctctgtctcttt
caaatcaccacatcagctggttgggatggtcttctcagtcctattttaaacactgggcca
ccgtactgtgatccgaacataactggtattataggcgaatgtggtaaacctgccataggt
attatgtattttgtaagttacatcattatatcatttctcattgttgtaaacatgtatata
gctgttatcctggagaacttcaatgctgctactgaggaaagtacagagcctttaggggaa
gatgactttgacatcttttatgaaatctgggagaagtttgatcctgaagcaactcagttt
ataactttctctgcactttcagactttgcagatgctctggctgaacctttacgtgtacca
aaaccaaacaaagttgaactcatagcaatggacctgcccatggtcagtggagataggatc
cactgcttggatatcttatttgcttttaccaaaagagtgttaggagattctggggtgctg
gatactcttaaagttcaaatggaggagaagttcatggatgccaatcaatcaaaaaaatcc
tatgagccaatctccactacactcagacacagacaagaagaagcttctgccactgttatc
cagcgtgcctacaggagtcatttgctcatgcgctctgtaaagcaggcttcttacctgtac
caacacagaacttgcagtggtgacactcttggaagtgatgctccagaaaaagaaggactt
attgcatctatgatgggtgaaaactatggtaagagtcctgacaaatctgaaactttgtcc
tcagcatcctttcctccatcatatgacagtgtcacaagagacagcagtggcaatctcatg
gttgagaatggagaaattacaggtaatcaccaatctgcagacattaaatag
DBGET
integrated database retrieval system
