Antrostomus carolinensis (chuck-will's-widow): 104523739
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Entry
104523739 CDS
T08541
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acar04515
]
104523739 (PCDH17)
Cell adhesion molecules [BR:
acar04515
]
Cadherins
Protocadherins
104523739 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_C_2
DUF7499
Motif
Other DBs
NCBI-GeneID:
104523739
NCBI-ProteinID:
XP_010164724
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MYLSICCFFLCWTPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGGGILPAERGAPGG
RNPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCWRSAKCQVSLEVFANDQEICM
IKVEIQDLNDNAPAFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLLTRDDYG
LFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPTRSGTVQINVRLIDSN
DNSPIFEAASYVVELPENAPLGTVVIDLNATDADEGTNGEVLYSFSGYAPERVRDLFSID
PQSGLIRVKGNLDYEENGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTIGFVSVR
QGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENYDNFYTVVT
DRPLDREAQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQVPENNI
PGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTK
HFEFHVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGVGYPV
GTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVVKVSD
HGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAAM
ITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKKKISKNDIM
LVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQ
GHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASL
RDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQ
NT seq
2836 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcctctgctggactcctgccctgtctctgaagaac
ctgaattactcggtgccggaggagcagggagcaggcacagtcatcgggaacatcggccgc
gatgcgcggctggcggcgggaggcgggattctgcccgcggagcgcggagctcctggcggc
cgcaaccccaagtccaccttccgggtactggagaactcggccccgcacctcctggacgtg
gacggggagagcgggctgctctacaccaagcaacgcatcgaccgagaggcgctgtgctgg
cgcagcgccaagtgccaggtgtccctcgaagtgtttgccaacgaccaggagatctgcatg
atcaaggtggagatccaggacctgaatgacaatgcaccagcgttcccttccgaccaggtg
gacatggacatctcagaaaatgctgcaccaggcacccgcttccccctcaccagcgcccac
gatccagatgctggggacaacgggctgcgcacctacctgctcacccgtgatgactacggc
ctcttctcccttgatgtgaagtctcgtggtgacggcacaaagtttccagaactggtcatc
cagaagccattagaccgtgaggagcagagccatcacaccctggtgctgacggccctcgac
ggcggtgacccaacgcgctcgggcaccgtgcagatcaacgtgcgtctcattgactccaat
gacaacagccccatctttgaagcggcctcctatgtggtagagctgccagagaatgcacca
ctgggtactgttgtcatcgatcttaatgccaccgatgctgacgagggtaccaatggagag
gtgctctactccttcagtggctatgcacccgagcgtgtccgtgatctgtttagcatcgac
cctcagagtggcctcatccgtgtcaagggcaacctggactatgaggagaatggcctcatt
gagatcgatgtccaggctcgggacctggggcccaatcccatccctgctcactgcaaggtc
actgtccgtctcattgaccgcaatgacaatgcacccaccattggctttgtctctgttcgc
cagggagcactgagtgaggctgccccaccaggcaccgtcattgcccttgtgcgagtcact
gaccgtgactcaggcaagaatgggcagctccagtgccgggtgctgggcggtggcggtggg
cccggagctgtccctttcaccctggaggagaactatgacaacttctacactgtggtcact
gaccgacccctggaccgcgaggcacaggatgaatacaatgtgaccattgtggcacgtgat
gggggtaaccccccactcaactccaccaagtcattttctgtccggatccttgatgagaat
gacaaccctccccgcttcagcaagaacctctatgtgctacaggtgcccgagaacaatatc
ccaggagagtacctgggctccgtcttggcccaggaccccgacttgggccaaaatgggaca
gtctcttactccattctgcccgggcacgtgggtgacgtctccatctacacctatgtctct
gtcaaccccaccaatggtgctatctacgccctgaggagcttcaactatgagcagacaaag
cactttgagtttcacgtgctggccaaagactcaggttcaccccaccgtgaaagcaatgcc
acggtgcgtgtcactgtgcttgatgtcaatgacaatgcgcccctcattgtcctgcctgcc
ctcatcaacgacactgccgagctgcaggtgccacgcaatgctggggtgggctatcccgtg
ggcacggtgcgtgccctggacagtgactttggggagagtgggcgtctcacatatgagatt
gtggaaggcaacgaggagcacctctttgagatggaccccactagcggtgagatacgcacc
ttgcacccctactgggaggagctcagccctgtggctgaactggtggtaaaagtcagtgac
catggcaagcccagcctctctgcagtggccaagctcattgtcagggccttggcggggccc
ctgcctgaggctggtgagccgcaggtgaatggtgagcagcatcggcgaccacactgggac
ttgtcgcttcccctgatcgtgacactgagcactgtctccatcatcttgctggctgccatg
atcactattgcggtgaagtgcaagcgagagaacaaggagattcgcacctataattgtcgc
attgctgagtatagtcaccctcagctgggaggagggggaggcagtggcgggggaggagga
ggcagtggcagtggagggggcaagggcaagaagaagaagatcagcaagaatgacattatg
ctggtgcccagcgagggcgaggacagccggggccccctcaatgtcatgaacgtggtgagc
agcccatccctggccacctcacccatgtactttgactaccagacccgcttgcccctcagc
tctcccaggtctgaggtgatgtacctgaagcccgcctccaacaacctgactgtaccccag
ggacatgtgggctgccacaccagcttcacagggcaagggactaacgccagcgaggctccc
ccgagccggatgtccataattcagacagacaattttcccgcagagcccaattacatgggc
agcaggcagcagtttgttcaaagtagctccacgttcaaggatccagaaagagccagcttg
agggacagcgggcatggggacagtgatcaggctgacagtgaccaagacactaacaaaggc
tcctgctgtgacatgtctgttagggaggcactcaagatgaaaactacttcaactaaaagc
cagccacttgaacaag
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