Antrostomus carolinensis (chuck-will's-widow): 104523761
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Entry
104523761 CDS
T08541
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acar03036
]
104523761 (CHD5)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104523761 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
CHDCT2
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
104523761
NCBI-ProteinID:
XP_010164751
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
GSNDEMSDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKEKKTKRKKKEEEEDDNEDGNLK
EPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLG
AKWREFSANNPFKGSSAAAAAAAIAAAVETVTVAAPLAASPQQSALPTVIRKAKTKEGKG
PGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSS
SVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVC
LDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEDDHMEFCRVCKDGGELLC
CDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPLPAVLP
TTDTDLALPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMD
EPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIH
YLIKWKDLPYDQCTWEIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGKKLKEE
KLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGL
GKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSV
IRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEA
HRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA
DISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFE
ALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLL
QKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAP
GAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFV
TRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMV
SQGQRITMPDAVTPFSDTLATKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISK
LLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFE
ERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQ
DAFNSHWLVHGPSWTGVWLPLRRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT
RIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKCSEVVSSDPNTPVPASPAHMHVGP
VALADKTETQLGFQEEREQVEQKPRKVSESQVPASAEKVESEEHPESCDSKEKPREEKQE
ESEKAEPPPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSEAQQN
GDKEEEEDGKKDNRNVNFRFMFNIADGGFTGRKESHTLWQNEERAAISSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFK
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
ggaagcaatgatgaaatgtcagacaacgaagaggagatcgaggagaaatctgagagtgaa
gggagtgactattcccccaacaaaaagaagaagaaaaaactgaaggagaagaaggagaaa
aaaacaaaacggaaaaagaaggaagaggaggaagacgacaacgaggatggaaatctaaag
gagcccaagagctcagcccagctgatggaggaatggggcctcgatgatgtagattacgtt
ttctcagaagaagattatcacactctgactaattacaaggctttcagccagtttctcagg
cctctgattgccaagaagaaccccaagatccccatgtccaagatgatgaccgtgctcggt
gccaagtggcgagagttcagtgccaacaacccgttcaagggcagctcggcagccgcggcg
gcagcggccattgctgcagcggtggagaccgtcaccgtcgccgcgccgctcgccgccagc
cctcagcagtcggcgttgcccactgtcatcaggaaggccaagaccaaggagggcaagggt
ccaggagtgcggaagaaaatcaagggctccaaagatgggaagaaaaaggggaaggggaaa
aaaatggcaggcttgaaattccggtttggaggaatccccagcaaaaggaaaaagggctcc
tctagcgaagaggaggaacgggaggaatccgacttcgacagtgccagcatcaacagctcc
tcagtgcgctccgagtgctcggctggcctggggaagagagggaagaggaggagaaagaaa
aagaggattgaagaaggagatgggtatgagacagaccaccaggactactgcgaggtgtgc
cagcagggaggggagatcatcctgtgtgacacctgcccccgcgcctaccacctcgtctgc
ctggaccccgagctggagaaggcccccgaggggaagtggagctgcccccactgcgagaag
gagggcatccagtgggagccaaaggaggaggaggaggaggaagaggaaggcggtgaggag
gaagaggacgaccacatggagttctgccgggtctgtaaggatggaggggagctgctgtgc
tgtgacacctgcccgtcctcctaccacctgcactgcctgaacccgccgctgcccgaaata
ccaaacggtgaatggctctgccctcgctgtacatgccctcccttgaagggcaaagtccaa
cgcatcctgcactgggcctggaaggagccgccggccgccccgctccccgccgtgctgccc
accacagacacggatctggctctgcccccacccaaggtgctggaggggatcccggagcgc
gagttcttcgtgaagtgggcagggctgtcctactggcactgctcctgggtcaaggagctg
cagctggagctctaccacaccgtcatgtaccgcaactaccagcggaagaacgacatggat
gagccaccagcctttgactacggctctggggatgaggacagccagagggagaagcggaag
aacaaagaccctcagtacgccaagatggaggagcggttctaccgctacggcatcaaaccc
gagtggatgatgatccaccgcatcctgaaccacagctttgataaaaagggagacatccat
tacctgatcaagtggaaagacctgccctacgaccagtgcacctgggagatcgatgagata
gacatcccctactatgaaaacctcaaacacctctactggaaccacagggagctgatgctg
ggggaggacacgcgccctctgaagaagctgaacaagaaagggaaaaagctgaaagaggag
aagctggaaaagcctccagaaacacctctcgtggatccgacggtgaagtttgacaagcag
ccgtggtacatcgacgccacgggaggcacgctccatccttaccagctggaggggctgaac
tggctgagattttcttgggcccaagggacagatacaatcctggctgatgagatggggctg
gggaagactgtgcagactattgtgttcttgtattccctgtacaaggagggccactcgaaa
gggccgtatctggtcagcgcccccctctccaccatcatcaactgggagcgtgagtttgag
atgtgggcacccgacttctacgtcgtgacctacacgggggacaaagaaagccggtctgtc
atcagggagaatgagttttcttttgaagacaacgccatccgaagcggaaagaaggttttc
cggatgaagaaagaagcccagatcaagttccatgtcctgctcacctcctatgaactgatc
actattgaccaggcagtgctgggctccatagagtgggcctgtctggtggtggatgaagct
cacaggctgaagaacaaccagtccaaattctttagagtattaaatagctacaagatcgat
tacaagctgctgctcactgggactcctctccagaacaacttggaagagctcttccacttg
ctcaatttcctgactcccgagaggtttaataacctggaggggttcctggaggagtttgca
gacatctccaaggaggaccagatcaaaaagctccatgatctgctgggtccccacatgctg
cggcggctcaaggcagatgtgttcaagaacatgccggccaagacggagctgatcgtgaga
gtggagctgagccagatgcagaagaaatactacaagttcatactgacgaggaatttcgaa
gccctgaattcgaaaggtggtgggaaccaggtctcactgctgaacatcatgatggacctg
aagaagtgctgtaatcacccgtacctcttccctgtggcggccgtggaggcccccgttctg
cccaatggatcctacgatgggaattctttggtcaaatcttctggcaaactgatgctgctc
caaaagatgctgaagaagttacgagatgggggtcacagagttctgatcttctcccagatg
acgaagatgctggacttgctggaggatttcctggagtacgaaggctacaagtatgagcgg
atcgacgggggcatcacgggcggcctgcgccaggaggccatcgacaggtttaacgctcct
ggtgctcagcagttctgctttctcctctctacccgcgccggcggtctgggcataaacctt
gctacagccgacacagtcattatttatgattctgactggaatccccacaatgacatccag
gcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatctaccgctttgtg
accagagcctctgtggaagagcgcatcacccaggtggccaaaaggaagatgatgctcaca
cacctggttgtccgcccggggctcggctccaagtcgggctccatgaccaagcaagagctg
gatgacatcctcaagtttgggacagaagagctcttcaaggatgacgtggaagggatggtg
tctcaggggcagcggatcaccatgccggatgctgtcacccctttctctgacacgctggca
accaaaggaggtgcagtgactcctggcatgaaaaaaaagcacggtggcaccccaccaggt
gacaataaggatgtggatgacagcagcgtgatccactacgacgacgctgccatctcgaag
cttctggaccgaaaccaggatgcgactgatgacacggagctgcagaacatgaacgagtat
ctcagctcctttaaagtggcccagtatgttgtgagagaagaggacggtgtggaggaggtg
gaacgtgagatcattaagcaagaggagaatgtggaccccgactactgggagaagctgctt
cggcaccactatgagcagcagcaggaagatctggccaggaacttggggaaagggaagaga
atccgcaagcaggtcaactacaacgacgcctctcaggaggaccaagagtggcaggacgag
ctctctgacaaccagtcggagtactccattggctctgaggatgaggatgaagactttgaa
gagaggccagaaggtcagagtggcagaagacaatcccggagacagctgaagagtgaccgg
gacaagcctctccctcctttgctggcaagagttggggggaatatcgaggttctcggcttc
aacgcccggcagcgcaaggcgttcctgaacgccatcatgcgctgggggatgcctccccag
gacgccttcaactcccactggctggtccatgggccaagctggaccggggtctggcttccc
ctccgcagggcgtacgtctctctcttcatgaggcatttgtgtgaacctggggcagacgga
gccgaaacctttgcggacggcgtcccccgggaggggctgtcccgccagcacgtgctgact
cgcattggagtcatgtcgctagtaaggaagaaggtccaggagtttgaacatgtcaacggg
aagtacagcaccccagatctgattctcgaggggccggagagcaagaagtgcagcgaggtt
gtgtcttcagatcccaacacccccgtcccagccagcccagcacatatgcacgtgggacct
gtggcccttgcagacaaaacagaaacacagctcgggttccaggaggaaagggagcaagtg
gagcagaagcccaggaaggtgtctgagagccaggtgcctgcgagtgctgagaaggtggag
agtgaagagcacccagaaagctgcgacagcaaggagaaaccgagggaggagaagcaagag
gagagtgaaaaggctgagcctcctcccgagccgctggtgaaagatgagggaattcaagag
aaggagaaacctttggagaagccagagttgaacagcagcccagggaaaggggaggacaaa
gaagtcaaaccagaggacaccaaggtggaggagaaggagcaaagcgaagctcagcaaaat
ggtgacaaagaggaagaggaggatggaaagaaggacaacagaaacgtgaacttccgattc
atgttcaacattgctgacggtggctttacaggtaggaaggaatcgcacacgctgtggcag
aacgaggagagggctgccatctcctccggcaagatctacgacatctggcaccgccgacac
gactactggctcttggcaggaattgtcactcacggctacgcccgctggcaggacatccag
aacgacccgcgctacgtgatcctgaacgagcccttcaagtcagagatacacaaggggaac
tacctcgagatgaagaacaagttccttgcccggcggttcaag
DBGET
integrated database retrieval system
