Antrostomus carolinensis (chuck-will's-widow): 104524293
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Entry
104524293 CDS
T08541
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar00100
Steroid biosynthesis
acar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104524293 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
acar01006
]
104524293 (FDFT1)
Enzymes [BR:
acar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104524293 (FDFT1)
Prenyltransferases [BR:
acar01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104524293 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
104524293
NCBI-ProteinID:
XP_010165413
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MTISLDVKVPMLQEFHSYLYKPEWKYMESKEKDRQVLEDFPTISMEFRNLSKVYQDVISD
ICHKMGVGMAEFLEKKVDSQHEWDEYCHYVAGLVGIGLSRLFSASELEEPIVGQDTELAN
SMGLFLQKTNIIRDYLEDQLEGREFWPREVWGRYAKKLSDLAKPENIDMAVQCLNELITN
ALHHVPDVITYLSRLKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGIVKIRKGQAVTLM
MDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQVIASIRAMSLPGSTITSRHHYSPI
YLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagcttagatgtaaaggtcccaatgctgcaagagtttcactcctatctctat
aaaccagagtggaaatacatggagagcaaggagaaggaccggcaggtgctcgaggacttc
ccaacgatctccatggagttcaggaacctgtcaaaggtctaccaggatgtgatttcagat
atctgccacaagatgggcgttgggatggctgagtttttggagaagaaggtggactctcaa
cacgagtgggatgagtattgtcactacgttgctggtctggtggggattggtctttcccgt
ctcttctctgcatcagagctggaagaacctatcgtcgggcaggacacagagctggcaaac
tccatgggcctcttcttgcagaaaaccaacatcatccgtgattatttagaagaccagctg
gagggaagggaattctggcccagagaggtttggggcagatacgcaaagaagctctcggat
cttgccaaaccagagaacatcgacatggctgtccagtgtctgaatgagctcatcaccaat
gccctccaccacgtccctgatgtcatcacatacttatcccgcctgaaaaaccaaagtgtc
ttcaacttctgtgctatcccccaggtgatggctattgccacgttggctgcctgctataac
aacaagcaggtgttcaggggtatcgtgaagatccggaagggacaagccgtcactctcatg
atggatgccacaaacatacaagctgtcaaagccatcatgtaccagtatgtggaagagatc
taccagaagatcccaagcacggacccatcatccaacaagacgcagcaggtcatcgcctcc
atccgtgccatgagcttacctggcagcaccattacatcacgccaccactactcccctatc
tacctgtcgtgtgccatgctcctggccgccctgagctggcagtacctcagcaccatctcc
aaggccaccgaggagtacgtccaggcaggcgagaactga
DBGET
integrated database retrieval system
