Antrostomus carolinensis (chuck-will's-widow): 104524396
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Entry
104524396 CDS
T08541
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104524396 (LTN1)
04121 Ubiquitin system [BR:
acar04121
]
104524396 (LTN1)
Enzymes [BR:
acar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104524396 (LTN1)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104524396 (LTN1)
Ubiquitin system [BR:
acar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104524396 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
zf-ANAPC11
FANCL_C
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104524396
NCBI-ProteinID:
XP_010165561
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
SLIGETFVERIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSSED
LLLTIFKLCAQRQDATHLTDLLLCKLKHTWMSGVNSLVRQLRNMQKQSGFLQKSALWVKN
QVQSSSLDVKSLQVLISAVTDLLSQLMEADRQSGYLVGAYVEHVTPNKTEWGKLRESLST
EWMHKPLLEGRLSMNCEPLGSCVKMCGTTKLPGHLCTSALLSKMMLLVLENGIVHGNNDA
ERKKIDNIIAELLYSLQWIEELENPSCLLLEYLHMLEEMHITYGKFSTLSNTTSLQQTIF
DRSEELGRLWSLTMAKVIRAENTVSCDIKQLFKTTEGFLPLTEGRLHTLQCLSPFLIEEE
KKELVFHCVAKLMTCTQTELSSTDGAFGCLSILNSCLRDRSIDCDHLLPGILKLIISWKN
DNEESFLFSCNLKETSAQVLGFNIEMIRYLPLLLKHSTAPLADNEWDFIMCSMLAWLETT
SENRSLYHVPLVQIFACVSCDLASALSIYFEAAAPETTENLPVNLISEWKEFFSEGIHNL
LLPLLVKVTGETKNASEGSFQNSVLTSLGEALKYISKDQLLNHKLPAKFVAGQKTNLPDK
LQTLLNTLSPLLLFRARPVQISVYHMLHKLMPELPKFDDEDLKSYGDEEEESALSPPAAL
MSVLATQELLLENILECIPVGECAVIQPLSDEFCLVLGYLLTWKLTLAFFKAASSQLRVL
YSQYLRRTKSLNKLLYHLFRLMPENPVFSGPTSEVPNKDTKTFFTEELHLDVKGTGVLSS
QIPHLACSVYHITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSSVLSSQEISAVQTST
QLFNGMTVKARSAAREVIATYSVDDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQWRN
WMLQLSTYLTHQNGSIMEGLSLWKNNVDKRFEGVEDCMICFSVIHGSNYSLPKKACRTCK
KKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
2969 nt
NT seq
+upstream
nt +downstream
nt
aatcattgattggtgaaacttttgttgaacgaattattgataaacttcaagcagctctgt
ctaaggctaaagatctttctgaagctggaaatactgaaccttcagtatctttcatctgtg
atgtagcctcaagctttttcagctcagttaaaggatgtttactgatgccatcctcagaag
acttgttgcttaccatcttcaaattgtgtgctcagaggcaggatgctacacacctaacag
atttacttttatgtaaattaaaacatacttggatgtctggtgtaaattcacttgtgcgtc
aacttcggaatatgcagaaacagagtggctttttgcagaaatctgcactgtgggtcaaga
atcaagttcagtcttcctctttggatgttaaaagccttcaggttttgatctctgcagtta
ctgatttgttgtctcagcttatggaagctgacagacaatctggatatcttgtgggagctt
atgttgagcatgtcacaccaaacaaaactgagtgggggaaattgcgtgagtctctctcca
ctgagtggatgcacaaacctcttttggaaggaaggcttagcatgaattgtgaacctttgg
gatcatgtgtcaagatgtgtggcacaactaaacttccaggccacctctgtacttcagcct
tattaagtaaaatgatgctacttgttttggaaaatggtatagtccatggaaacaatgatg
ctgaaagaaagaaaattgacaatataattgcagagctgttgtactcattacaatggattg
aagaattggagaatccttcttgtctgcttctggaatatctccatatgttagaagaaatgc
acatcacgtatgggaagttcagtacacttagtaatacaactagccttcagcaaacaatat
ttgatagatcagaggaactcggaagactctggtccttaaccatggctaaagtgattcgtg
cggaaaacactgtatcctgtgacatcaaacagctttttaagacaacagaagggtttctgc
cattaacagagggcagattgcatacacttcagtgtctatcaccgtttttaattgaggaag
aaaagaaagaacttgtcttccactgtgtggccaaacttatgacgtgcacgcagacagaac
tttccagcactgatggagcatttgggtgtctttccattttgaactcctgcttgcgtgata
gaagtattgattgtgatcacctactacccggaatactaaaactcataatatcttggaaaa
acgataatgaggagagctttctctttagctgcaatctgaaagaaacaagtgctcaggtgc
ttggtttcaacatagagatgatccgttaccttcccttgttactgaagcattccacagctc
ctttggccgataatgaatgggactttatcatgtgctccatgctggcttggctagagacaa
caagtgaaaaccgttcactttatcatgtgccgcttgtgcagatttttgcttgtgtcagtt
gtgacttggcatctgcccttagcatttactttgaagctgcagctcctgaaactactgaaa
accttcctgtgaacttaatcagtgaatggaaagaattcttttctgaaggaatacacaatt
tgctattacctttgttggtgaaagtcacaggagaaaccaaaaatgcatctgaaggctcct
ttcagaattctgtgttaacatctttgggtgaagctctcaagtacatctcgaaggaccagt
tgttaaaccataaattgccagcgaagtttgttgcaggccagaaaacaaatcttccagata
aactccagactctgctaaatacgttatctccattgttgcttttccgggctaggcctgtac
agatttctgtctaccatatgttgcataaattaatgcctgaattgcctaaatttgatgatg
aagatctcaaatcttatggtgatgaagaggaggaatcggcattatcacctcccgcagctc
ttatgtctgtcctggccactcaagaactcttgctagaaaacatcctggaatgcattccag
ttggagaatgtgcagttattcagcccctgagtgatgagttctgccttgttctaggatatc
ttctcacttggaagttaacattagctttcttcaaagcagcttcttctcagctgcgagttc
tctactcacaataccttagaagaactaaaagcttgaataaactgctttatcacttgttca
ggcttatgcctgaaaaccctgtcttttctgggccaacttcagaagttccaaataaggata
caaaaaccttctttactgaagagcttcatttagatgtcaaagggacaggagtcttgtcat
cccagattccgcacttggcctgctccgtgtaccatattacactgaaagacttgccagcca
tggtcaggctgtggtggaacagctgtgagaaacgtgtcttcaatgttgtagataaattta
caagcaaatatgtcagcagcgtgctttcttcacaggaaatatctgctgttcagactagca
cacagttatttaatggcatgacggtaaaagctcggtctgcagcacgagaagtcattgcta
cctattcagttgatgatatatttattgaactaataatacagcttccatcaaattacccac
tgggatccataacagttgagagtggaaagagggttggtgtggctgtacagcaatggcgca
attggatgctacagttaagcacgtatcttacacatcagaatggaagtattatggaaggct
tatctttgtggaaaaataatgtggataaacgttttgagggcgttgaagactgcatgatct
gtttttcagtcattcatggttccaactattctcttcctaaaaaagcttgcagaacatgca
agaaaaaatttcattcagcttgcttgtacaaatggttcacatccagcaacaaatccacct
gtccactctgtcgagagacatttttctga
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integrated database retrieval system
