Antrostomus carolinensis (chuck-will's-widow): 104524844
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Entry
104524844 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04142
Lysosome
acar04144
Endocytosis
acar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104524844
04142 Lysosome
104524844
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104524844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acar04131
]
104524844
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104524844
Membrane trafficking [BR:
acar04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104524844
Exosome [BR:
acar04147
]
Exosomal proteins
Proteins found in most exosomes
104524844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
104524844
NCBI-ProteinID:
XP_028940757
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIXXXXXXXXXXXLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
IKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLAST
LVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYY
QDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQF
YLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNL
LTEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKK
DRLYKDAMQYAAESKDADLAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHN
IMDFAMPYFIQVMREYLTKVDGLFYKVDKLDASESLRKEEEQVTEPTPIVFGQQLMLTAG
PSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgaatgatccaacaacacccatcagacgtccaatttctgccgaaagtgcc
atcatgaatccagcctctaaagtaattgcgctaaaagatgctgggaaaacacttcagatc
tttaacattgagatgaaaagtaaaatgaaagcccacacgatggcagaggaagtgatcttc
tggaaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactgg
agcatggaaggagagtcacaaccccaaaagatgtttgacaggcacgctagtcttgcaggc
tgccaaatcatcaattacagaaccgatgaacaccaaaaatggctgctgctgataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgatcgaaaagtc
tcccagcctatagagggccatgcagcagcttttgcagaattcaaaatagaaggaaatgcc
aaaccttctaccctcttctgttttgctgtgaggagtcctgcagggggcaagctacacata
attgaagtaggccagccagctactggaaatcaaccatttgttaagaaagctgttgatgtg
tttttcccacctgaggcacagacagactttcctgtggcaatgcagattggaattaagcat
ggtgttatctacctgatcacgaagtacggatatattcacatgtatgacttggagtctgga
gtgtgcatctacatgaaccgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgag
gaagacaacatagtgaactatgctacaaatgttctccagaaccctgacttgggattgcgt
atggctatacgtagtaatctagctggggcagaggaattatttgccagaaagttcaacaca
ctgtttgctcaaggaagctatgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagtgatacaatcaggaagttccagagtgtaccagctcagcctgggcag
gcctctcccctgctccagtactttggaatattgcttgaccagggacagctgaacaagttt
gagtctctggagctctgtcgccctgtcctacagcagggccgcaagcagcttctggagaag
tggctgaaggaagacaagctggagtgctcggaggagctgggagacttggtgaagacagct
gacccaacccttgcgctcagtgtctatcttcgagctaatgtgccaaacaaagtgattcag
tgctttgctgaaactggtcaattccagaaaattgtgctgtatgctaaaaaggttggctat
accccagactggatcttcttactgaggagtgtgatgagagtcagtccagaacaaggcctg
cagttctctcagatgctggtacaagatgaggagccactggctaacattaaccagattgtg
gatgtgttcatggagaacagtcttattcagcagtgcacatcctttctcttggatgctctg
aaaaataaccgccctgcagaaggccaccttcagactcgtctcctggaaatgaatttgatt
catgccccacaggttgcagatgccattcttggaaaccaaatgtttacacactacgatcgt
gctcatattgcccagttatgtgaaaaggccggcttgctccagcgagctttagaacactac
acagatctctatgatattaaacgtgctgttgttcatactcacctcttgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactctgtggagtgtttgcgtgccatg
ctgtccgccaatattaggcaaaacctacagctctgtgtgcaagttgcttctaaataccat
gagcagcttggtacccagtctcttgtggagctttttgaatctttcaaaagctatgaagga
ctgttctatttcttgggttccattgtaaacttcagccaggatccagatgttcacttcaag
tacatccaggcagcttgcaagactggtcagataaaggaagtggaaagaatctgccgtgaa
agtaactgctataaccctgaacgggtgaagaactttctgaaggaggcaaagctcacagac
cagcttcctctgatcattgtctgtgaccgatttgactttgttcatgacctggtgctctac
ttatatcgcaataacctgcagaagtatatagagatctatgtacagaaggtgaatcctagc
cgtataccagcagtggttggagggcttcttgatgtggattgttctgaagatgtcattaag
aacttgatcatggtggttagaggccagttctcaacagatgagctggtggctgaagtggaa
aaaagaaatcggcttaagttgctgttgccgtggcttgaatcaaggattcatgaaggctgt
gaagaacctgcgacgcataatgccttggccaaaatcnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnntccttcgtgagaatccttactatgacagccgtgtagttggcaaatactgtgaa
aagagggaccctcatctggcctgtgttgcttatgagagggggcagtgtgatctggagctc
ataaaggtctgcaatgagaactcactgtttaagagtgaggctcgctatctggtgcgcagg
aaggaccctgagctctgggcaaatgttctggaagaaaacaacccattcaggaggcagctt
attgaccaggttgtccaaacagctttatcagagacacaggacccggaggaggtttctgta
actgtgaaagctttcatgactgctgacctgcctaatgaattgattgagttattggaaaaa
attgtcttggataattctgtattcagtgaacacaggaatctccagaatctgctgatcctg
actgccattaaggctgaccgcactcgtgtgatggaatacatcaatcggctggataactat
gatgccccagatattgcaaacattgccatcagtaatgagctatatgaagaagcctttgct
atattcaggaaatttgatgttaatacttcagcaattcaggtgctgattgagcacattggc
aacttagaccgtgcttatgaatttgcagaaagatgtaacgagccagcagtatggagccag
ctagccagagcacaactccagaaggacttggtgaaagaagccattgactcctacataaag
gcagatgatccatctgcctacatggaagttgttcaagcggctaatagaaatgataactgg
gaggacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagag
acggaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttatt
agtggccctaataacgcccatatacaacaggttggtgatcgctgttacgaagaggggatg
tatgaagcagcaaagctactgtataacaacgtatccaactttgctcgcctggcttctacc
ctggtgcaccttggagagtatcaagcggcagtggacagtggccgcaaagccaacagcaca
aggacttggaaggaggtctgcttcgcctgtgtggatggaaaagaattccgcttggcacag
atctgtggcttacacatagtcatccatgctgatgaacttgaagagctgatcagttactat
caggatcgtggctactttgaagaactgattgcccttttggaagctgctttgggcctagag
cgtgctcacatgggcatgtttactgaacttgccatcttgtactccaaattcaagcctcag
aaaatgagggaacatctggagctcttctggtctagagttaatattccaaaggtgctcaga
gctgcagaacaggctcatctctgggcagaacttgtattcctctatgacaagtatgaggag
tatgacaacgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcag
tttaaagacataattgctaaggtggcaaatgtagagctgtactacaaagccttgcagttc
tatttagactacaaacctctgctgatcaatgatctcctgcttgtattatctccacgactg
gatcacaccaggacagtcaattttttctcaaaggttaatcagctacttctagtaaagcct
tatctgcgttcagtccagaaccacaacaacaaaggagttaatgaagctctaaacaacctt
ttaacagaggaggaagattaccagggtttgagagcttctattgatgcctatgacaacttt
gataacataacgttggctcagcgtctggaaaagcatgaactaattgaatttaggcgtatt
gcagcctacttatataagggtaacaaccgctggaaacagagcgtggagctctgcaagaaa
gaccgtctgtataaggatgctatgcagtatgctgcagagtccaaagatgcagacctagct
gagaagttgcttcagtggttcctggaagaaggcaagcaggagtgctttgcagcctgcctt
ttcacatgttacgacttgctgcacccagatgtagtccttgagttggcatggagacataac
atcatggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtt
gatgggctgttctataaggtggataaacttgatgcttctgaaagcctaagaaaagaagag
gaacaagtaactgaacccactccaatagtatttggccagcagttgatgttaacagcaggc
cccagtgcggtgcctccccaggcaaacttcccatatggatacacagcaccaggattcacc
cagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
