Antrostomus carolinensis (chuck-will's-widow): 104525033
Help
Entry
104525033 CDS
T08541
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104525033 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acar01009
]
104525033 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acar04515
]
104525033 (PCDH20)
Protein phosphatases and associated proteins [BR:
acar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104525033 (PCDH20)
Cell adhesion molecules [BR:
acar04515
]
Cadherins
Protocadherins
104525033 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
He_PIG
Motif
Other DBs
NCBI-GeneID:
104525033
NCBI-ProteinID:
XP_010166386
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
HLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLARKSCVQPSTXPEVPQPQR
SFTLASHGLGGQYVQLDNRSGELHTSAMEIDREALCVESSGATIFGGAAAVSSSSFSPSS
ESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPCFPVPHIRLSVPENAPVNTRLAIEHP
ALDPDVGTNSVQTYRLRDNYGVFTLDVEENENGERTPYLIVMGALDRETRGEYVTVIVAE
DGGTPPLVGSATLTIGISDINDNCPQFSESQLNITLYGNSSLGTHVATVHAVDMDLGSNA
QITYSYSQKVPQPSRDLFHLDESTGTITLSTKIDGDTPRLHRLIILGNGPGCIPAVITVL
VTIIKVMMRPPEIVPRFIANEAEGVVYLKELEPVNTPIAFFTIKDPDEKYKVNCYLDGDG
PFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFNVNKIIKVQVLDDNDNSP
VFSQQLIELSIEENNVPNAFLTKLHATDADSGERGRVSYFLGPDAPSYFSLDKTTGVLTV
STQLDREEKEKYRYTVKAVDSGYPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFP
GFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYILWIE
AVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKD
TGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPL
HSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPTHKKMESASCMPTLVVL
SIISLGSITLVTGMGIYICLRKGKKHHRAEENLEVQIPLNGRINLHMLEKKPVEISNI
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
cacttgctcctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgc
gccaccgagctcttctacagcctcaatgaggggctgcctgctggggtgctcatcggcagc
ctggcccgaaaaagctgcgttcagccgtccaccncccctgaggtcccccagccccaacgg
tcctttactctggcttcccatggcttggggggacagtatgtgcagctggacaaccgctct
ggggagctgcacacctcagccatggagatagaccgtgaagctctgtgtgtggagagcagt
ggggccaccatcttcgggggagcagccgctgtctcctcctcgtccttctcgccctcatct
gagtcatgcctgctgctgctggatgtgctggtgctgccacaggagtacttccgcctggtg
aaggtaaaaattgctatccgagatgtcaacgacaacgcgccctgcttccctgtgccccac
atccgcctctcggtgcctgagaacgcacctgtgaacacccgcctggctatcgagcacccc
gcccttgaccccgatgtgggcaccaacagtgtccagacctaccgcctgcgtgataactat
ggtgtcttcaccctggatgtggaggagaatgagaatggggagaggactccctacctcatt
gttatgggggccctggacagggagacacgaggggagtatgtcacagtcatcgttgctgag
gatggggggactcctccactcgtgggcagtgccaccctcactattggcatcagtgacatc
aatgacaactgcccccagttcagcgaatcgcagctcaacatcaccctttatgggaattcc
agtctagggacgcacgtggccactgtccatgcagtagatatggaccttggatccaatgcc
cagatcacctactcctacagccagaaggtcccccagccatccagagacttgttccatcta
gacgaaagcacaggaaccatcacgctctccactaaaattgatggggacactccaaggctc
cacaggctgatcatactgggcaatggcccaggttgtatccctgctgtgatcacagtgcta
gtaaccatcatcaaagtcatgatgaggccacctgaaattgtccctcgtttcatagctaat
gaagcggaaggggtggtgtacttaaaggagctggagcctgtcaacacaccgatagcattt
tttaccattaaagaccctgatgaaaaatacaaagtcaattgctatttggatggtgatggg
cctttcagactctcaccatacaagccgtacaacaatgaatacctgctagagaccacaaag
cctttggactatgagacacagcagctgtatgaaatctctgtagttgcttggaactcagaa
ggttttaatgtcaacaaaataatcaaagtacaggttctggatgacaatgacaactcacca
gttttctctcaacagctgatagagttatccattgaggaaaacaatgttcccaatgctttc
ttgaccaaactgcatgctacagatgctgacagcggagaaagagggcgcgtgtcctatttt
ttagggcctgatgccccttcctatttttctttagataaaactacaggagttcttacagtt
tccacccagttggacagagaagaaaaagagaaatacagatacactgtcaaagcagtagat
tctgggtatcctccaagagaatcaatagcaactgtcaccatcactgtattggataaaaat
gataatagtccaagatttatcaataaggatttcagctttttcgtgccagaaaactttccg
ggttttggggaaattggagttataagtgtcacagatgctgatgcagggcaaaatggatgg
gttgccctttcagttctgaatggaagtgatatttttgtcatagatactggaaaaggagtt
ttgagagctaaagtctccctggacagggagcagcaaagctcctacattctgtggatcgaa
gcagttgatggcggtgatcctgccctgtcctctactgcaaaaataactatccttcttctg
gacataaatgataacccacctttggtcttgtttcctcagtctaatatgtcttatttgttg
gtccttccttctacccttcctggctctcccatcactgaggtctatgctgttgataaggac
actggcatgaatgcagtcatagcatacagcatcataggaagaagaggccctcgaccagag
tcatttaggattgaccctaaaactggtaatatcaccttggaagagtcactgatgcaaaat
gactatggcctctatcgactgcttgtaaaggttagtgatcatggctatccagaacctctc
cactccactgtgatggtgaacctttttgtcaatgacactgttagcaatgagagctacatt
gaaagtttgttgagaaaggagcctgatatcagtatagaagaaaaacagccacaaatatcc
atagagcctacacataaaaaaatggagtcagcatcctgcatgcctaccttggtagttctg
tcaataataagcttgggttcaatcactttagtaacagggatgggcatttacatctgtctg
agaaaaggtaaaaagcatcacagagcagaggaaaacttggaagtacaaatcccattaaat
ggaagaattaacctgcacatgttggagaagaaaccagtggagatttctaacatttga
DBGET
integrated database retrieval system
