Antrostomus carolinensis (chuck-will's-widow): 104525055
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Entry
104525055 CDS
T08541
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104525055 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104525055 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104525055 (TNC)
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104525055 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
EGF
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
hEGF
NDNF
EGF_integrin
EGF_Tme5
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
104525055
NCBI-ProteinID:
XP_010166410
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MGLLTQVLACTILALLYQHVNGGLIKRIIRQKREAGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTTSGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCICEP
GWKGPNCSEPNCPHNCFNRGLCVQGKCICSEGFTGEDCSQATCPSDCNDQGKCVDGVCVC
FEGYTGTDCSEELCSQGCSVHGKCMSGQCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCNEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFTGEDCGELTCPNNCNGNGRCENG
LCVCYEGFVGDDCSEKRCPKDCHNRGRCVGGRCICHEGYLGEDCRELRCPSDCHNHGRCV
NGQCVCHEGFIGEDCGELRCPNDCHNRGRCVNGQCVCHEGFTGDDCGELRCPNDCNSRGL
CVNGQCVCDEGYTGEDCGELRCPEDCHNRGRCVEGRCECDNGFTGEDCGELSCPNDCHQR
GRCINGRCVCHEGFTGEDCREQSCPNDCNNAGRCIDGGCVCEEGYMGDDCSNVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPGNQTAATIHELEPGVEYFI
RVFAVLKNKKSIPVSARIATYLPAPEGLKFKSVRETSVQVEWDPLNFSFDGWELVFRNIK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSKVITTKLDAPSQIE
AKDVTDTTALITWSKPLAEIEGIELTYGPKDIPGDRTTIDLSEDENQYSIGNLRPHTEYE
VTLVSRRGDMESDPMKEVFVTDLDAPRNLKRVAQTDNSITLEWKNSHANVDNYRIKFAPI
SGGDHAEITVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKD
LEVSDPTETTLSLRWRRPVAKFDRYRLIYVSPSGRKNEVEIPVDSTSFILRGLEAGTEYT
ISLVAEKGRHKSKPTTVKGSTEEEPELGKLSVSETGWDGFQLTWTAADGAYENFIIQVQE
SDNPEETRNITVPGGLRFLNVTGLKANTPYNITLYGVIQGYRTKPLSVETVT
NT seq
3397 nt
NT seq
+upstream
nt +downstream
nt
atgggacttctcacgcaggttttggcctgtacaatcttagctttgctgtaccagcatgtc
aatggtggactcatcaagcgaattatccggcagaagcgggaagctgggctaaatgtgacc
ttgccagaggataatcaacctgtggtttttaaccatgtctacaacattaagttgcctgtt
ggctccctttgctctgtggacctggatacaacgagcggtgatgcagacctgaaggcagaa
attgagcctgtcaagaattacgaggagcacacagtgaatgaggggaaccagattgtcttc
acgcaccgtattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtatcctccctacgggagcagtgt
gccagtggggctggatgctgtcctaattcccaggcggtagaaggtcgcctggacacaaca
ccctattgcagtggacatggcaattacagcatcgagatctgcggctgcatttgtgagcct
ggctggaaaggccccaactgctccgaaccaaactgcccacacaactgcttcaaccggggt
ctctgcgtccagggcaaatgtatctgcagtgaaggcttcactggtgaggactgcagccag
gccacctgcccatctgactgtaacgaccaaggcaagtgcgtggatggggtttgcgtgtgc
tttgaggggtacacaggcacagactgcagcgaagagctctgctcccaggggtgcagtgtg
catgggaagtgcatgagcgggcaatgcgtgtgccacgagggcttcaccggcgaggactgc
agcgagcccctctgccccaacaactgccacaaccgtggacgctgcgtggacaacgaatgc
gtttgcaatgagggctacactggcgaggactgcagcgagcttatctgccccaatgactgc
tttgaccgtgggcgctgcgtcaacgggacctgcttctgcgaggagggcttcaccggggag
gactgtggggagctgacctgccctaacaactgcaatggcaacgggcgctgtgagaatggg
ctgtgtgtctgctacgagggctttgtgggggatgactgcagtgagaagaggtgcccgaag
gactgtcacaaccgtgggcgctgcgtgggtgggcgctgcatctgccacgagggttacctg
ggtgaggactgtagggagctgaggtgccccagtgactgtcacaaccatgggcgatgcgtc
aacgggcagtgtgtgtgtcacgaaggcttcattggggaggactgtggggagttacggtgc
cccaatgactgtcacaaccgcgggcgctgtgtcaatgggcagtgtgtgtgtcacgaggga
ttcactggggacgactgtggtgagctgcggtgcccaaatgattgcaacagccgtggactc
tgtgtcaatgggcagtgtgtgtgtgatgaggggtacacaggggaggactgcggggagctg
aggtgccctgaagattgccacaaccgtggccgttgtgtggaaggacgctgtgagtgtgac
aatggcttcacgggggaggactgcggtgagctgtcctgccccaacgactgccaccagcgt
gggcgctgcattaatgggcgctgcgtgtgccacgagggcttcacgggggaggactgccgt
gaacagtcctgccccaatgactgcaacaatgcgggccgctgcatcgacggagggtgtgtc
tgtgaggaaggttacatgggggatgactgctccaatgtgtctcctccaacagaactgact
gtgacaaacgtaacagataaaactgtaaatctggaatggaagcacgagaatctcgtcaat
gagtacctcatcacctacgtccctaccagcagtggtggcttagatatgcagttcactgtg
ccaggaaaccagacagctgccactattcatgagctggaaccaggtgtagaatattttatc
cgtgtctttgcagtccttaaaaacaagaagagtattccagtcagtgccaggatagcaaca
tatctgcctgctccagaaggtctgaaattcaaatctgttagagaaacgtctgtccaggtg
gagtgggatcctctgaacttttcatttgatggctgggagctggtattccgtaatatcaaa
aaggatgataatggagatataaccagcagcttgaaaaggccagagacatcttacatgcag
ccaggtttggcaccaggacaacagtataatgtatctcttcatatagtgaaaaacaatacc
agaggaccaggactatccaaagtgataaccacaaagcttgatgcccctagccagattgag
gcaaaagatgtcacagacaccacagctcttatcacatggtccaaacctttggctgaaatt
gaaggtatagagctcacttatggccctaaggatattccaggggacaggacaaccattgac
ctctctgaagatgaaaaccaatattctatcggaaacctgaggccacacacagagtatgaa
gtgacactcgtctctcgtcgaggggacatggaaagcgaccccatgaaagaagtctttgtc
acagacttggatgctccaagaaacctgaagcgggtggcacagacagacaacagcattact
ttggagtggaaaaacagccacgcaaatgttgataactatagaattaagtttgctcccatc
tctggtggagaccatgctgagatcacagtgccaaagggcaaccaagcaacaacgagagct
acactcacaggcttgaggcctggaactgaatatggcattggagtgacagcagtgagacaa
gacagggaaagtgctcctgctaccattaacgctggcactgatcttgataaccccaaggac
ttggaagttagtgaccccactgaaaccaccttatcccttcgctggagaagaccagtggcc
aagtttgatcgttaccgcctcatttatgtcagcccctctggaaggaagaacgaagtggag
atccctgtggacagcacctcttttatcctgcgagggctggaggcagggacagaatacacc
atcagtctggtggcggagaaaggaagacacaaaagcaaacccacaactgtcaagggttcg
actgaggaggaacctgagcttggaaaattatcagtatcagagactggctgggatggtttc
cagctcacctggacagcagctgacggggcctatgagaactttatcattcaggtgcaggag
tctgacaatcccgaagaaacccggaatatcacagtcccaggtggactgcgctttctgaat
gttacaggactcaaggccaacacaccttataacatcacactttacggtgtgattcaaggc
tacaggaccaaacccctttctgttgaaactgtgacag
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