Antrostomus carolinensis (chuck-will's-widow): 104525171
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Entry
104525171 CDS
T08541
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104525171 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acar01001
]
104525171 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acar04054
]
104525171 (CIITA)
Enzymes [BR:
acar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104525171 (CIITA)
Protein kinases [BR:
acar01001
]
Serine/threonine kinases: Other
TAF1 family
104525171 (CIITA)
Pattern recognition receptors [BR:
acar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104525171 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_14
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
104525171
NCBI-ProteinID:
XP_028940856
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
RKKVDIWQYFVFLAGNLILDEIAPENTEKFTDREMQKCYKRTFLGSAESCSDASEPKYKK
IVEVPAVSAGNGSFLAVPLTSHPAASTLLTNQHVSFSVPATSALDRSFVIPVSGPSAPLI
PECLSVSMKGSQENTGFADPPRQIFSFVLGNGTSDVIIYPVLNSSMETLISPSFPVKICG
LEMFKEVRVPKIPSEEPFKRPKPVEAFCTSLMDYFRDVCKSVAMEREVTLDHLFIDGTLV
QSQTETKSGKNSVKTMEKELATWSLQGKEKAALQRSQIFQIPGGKDLXXXXXXXXXMGKS
ILVQKICQDWSNGELSQFEFVFWFDCKQISLSEKRYSLKDLLLEFFVKPQEGSKEIFEYI
LQNPAKVLLVFDGFEGLHDHENVPRCSASQPEKDLCSIKELLFGLIQKKILNGCTLLLTA
RPKDKVYQYMSKVDKTIEILGFSPQQRELYITKYFEGLPYCDNALKLIKEQEYLFSHCYS
PVMCRFVCFLCETVLETGDKSLPSTLTTIFLKFVQQKITPMQTDITAMQNQESLATLARI
AWYLGGKHQSAMKSDLLPSKEVKEFALKYGFFLPFAFPKLSDSGEEEFGSTFSDFVTQNF
LGALHLMLAEEVKDKSLTKYLSFLSKKKKPYNWLDLVSRFLAGLLFLQDDPYFCFLSSKD
VNQPTKKPKTLLKHIRRLQINELCPERLLELLHCIYETQSNYLLQHVALRLKPDLSFLGV
VLTPPDVHVLHSILKKSRKEFSLDLQNSSIDMQGLKDLIGLKNVASFRASLSDTVRLWNS
LEQTKDYELLRASTEKFVLDPFKVKTMKDVSDLSDLVEMQEKMINCVQDASGCSSYEIPA
IKNLRKIEFALGPVCGLQGFLKLVEILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPT
LTSLETLNLSQNKITDVGAEKLATALPSLSSLKTLSLYNNSICDFGAENLAKVLPAMASL
RVLDVQYNKITGVGAQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3049 nt
NT seq
+upstream
nt +downstream
nt
gagaaaaaaggttgacatttggcaatatttcgtgtttttagcagggaaccttattttgga
tgaaatagctcctgaaaacactgagaaatttactgacagagagatgcagaaatgttacaa
gcgaaccttcttaggctctgcagagagttgctctgatgcttcagaacccaaatacaagaa
aattgtggaagtccctgcagtgtctgcagggaatggcagtttcttagctgtgcctctcac
cagccatcctgctgcctccaccttactaactaaccagcacgtgtccttttctgttccggc
taccagtgcactggacagaagtttcgtaattcctgtttcaggaccttcagcacccttgat
tccagagtgtctgtctgtcagcatgaaagggagccaagagaatacaggctttgcagatcc
tcctcggcagatatttagcttcgttcttggaaatggcacatctgatgttataatatatcc
agtgctgaattcttcaatggaaacattgatatccccaagttttccagttaaaatctgtgg
tttagaaatgttcaaagaagtcagagttcccaaaattccttctgaagaacctttcaaaag
accaaagccagtggaagctttctgtacatcacttatggattatttccgagacgtgtgcaa
atccgtggccatggagcgtgaagtaactcttgatcacctgtttattgatgggacacttgt
tcaaagccaaactgaaaccaagagtgggaagaatagtgtaaaaacaatggaaaaggagct
ggcaacttggagtctgcaagggaaggaaaaggcagcccttcaaagaagccaaatatttca
aatcccaggaggtaaagacttagnnnnnnnnnnnnnnnnnnnnnnnnnnatgggcaaaag
cattcttgttcagaagatctgtcaggactggtccaatggagagttgtcccaatttgaatt
tgtattttggtttgactgcaaacaaataagcttgtctgagaagcgatacagcctgaagga
tctgcttcttgaattttttgtaaaacctcaagagggaagcaaagagatctttgagtatat
attgcaaaatcctgctaaagtccttctggtttttgatggttttgaagggttgcacgatca
tgagaatgttcctcgttgctcagccagccagcctgaaaaagacttgtgcagtataaaaga
gctgctttttggattaatccaaaaaaagatactcaatggttgtactttattacttacagc
aagaccaaaagacaaggtgtaccagtatatgtccaaagtggataaaactattgaaatatt
aggattttctcctcaacaaagagaattatacataaccaaatattttgaaggattacccta
ctgtgataatgcactgaaattaatcaaagagcaggagtacttgttcagtcattgttacag
ccctgttatgtgtagatttgtttgttttctctgtgagacagtacttgaaacaggagacaa
aagccttccttcaactcttaccacaatcttcctgaaatttgttcagcaaaagataacacc
tatgcaaacagatattacagccatgcaaaatcaagagagtcttgctacattagcccgtat
agcctggtaccttggaggaaagcaccagagtgccatgaaaagtgatcttcttccttctaa
agaagttaaagagtttgctctgaaatatggatttttcctgccatttgcattccccaaact
ttcagatagtggagaagaggaatttggaagcacattctctgattttgtcactcagaattt
cttgggtgcgcttcaccttatgttagcagaagaagtaaaggataaaagtctaacaaagta
cctgtcttttctatccaagaagaaaaaaccatataactggttagatttagtgtctcgatt
tttggctggattgttgttcctccaggatgacccctacttctgctttctttcaagtaagga
tgtgaaccagccaaccaagaagccgaagacactcttgaaacatattagaaggctgcagat
aaatgagctctgtccggagaggttacttgagcttttacattgtatttatgaaacacaaag
caattatcttttgcagcatgtggccttaaggctcaagccagacctgtcttttctgggtgt
agttctcacaccacctgatgtccatgtactgcactctattttaaaaaaatcaagaaaaga
gttttccttggatttgcaaaacagcagcattgacatgcaagggctaaaagacttgattgg
cctaaagaatgtggcatcattcagggcctccctcagtgatacagtcaggctctggaattc
tttagaacagacaaaagactacgaactgctaagagcatcaacagagaaatttgttcttga
tccctttaaggtgaagacaatgaaggatgtcagtgacctttcagaccttgtagagatgca
ggagaagatgatcaattgtgtgcaagatgcgtctggttgcagcagttatgaaattcctgc
catcaaaaacctcagaaaaatagaatttgcgctgggtccagtgtgtggccttcaaggctt
cctaaaactcgtggaaattcttgcagcatttccatcacttcagcatttagaccttgatgc
tctgagtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtctttccaac
cctgacatcactggaaacattaaacttatcacagaataagataacagatgtgggtgcaga
gaaactagctacagctcttccttccttgtcttcgttaaagacactaagcttatacaataa
tagcatttgtgattttggagcagaaaatcttgcgaaagttcttcctgcgatggcatcttt
aagagtgctagatgttcagtataacaaaataactggtgttggagcccagcagctgactga
cagcctacgaaaatgtccccatataaagaacctggtgatgtggaaccccaccattcccta
tggagttctcgagcaccttcagcagctggactctaggattagtgtgtag
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