Antrostomus carolinensis (chuck-will's-widow): 104525193
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Entry
104525193 CDS
T08541
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104525193 (CTR9)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104525193 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_6
TPR_7
TPR_11
ARM_TT21_5th
TPR_Slam
ANAPC3
ARM_TT21_4th
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104525193
NCBI-ProteinID:
XP_010166574
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MTIKFQGSEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLEA
ARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMY
DQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYY
KKALRTNPGCPAEVRLGMGHCFVKLNKLEKAXXXXXXXXXXSKCVGALVGLAVLELNNKE
ADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAE
SCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKV
LKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDI
QGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEH
DEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNF
YEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLAL
GNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREAR
DVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARAL
FKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELE
LAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQ
EKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKEKKRGGGG
GRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKRRRPQKAD
EGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLK
IADDGHARHSNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSTVRPSEEDSDSDR
SARKRRRSDSEQSDNESVQSGRSRSGGSENESRPASRSADSDRDSERGSDNEGSGRGSGN
ETEPEGSNDEGSEGGSDDSD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgactataaaatttcagggctctgaggttattgagcttgacttcgatcagttacctgag
ggtgatgaagttataagtatactgaaacaggaacacactcagctgcacatatggattgcc
ttagcgctggaatactacaaacaagggaaaacagaagactttgtgaagctgttggaagct
gcacgtatagatggcaacttggactatagagaccatgaaaaagatcagatgacgtgtctg
gatactttggctgcatactatgtgcagcaggctcgaaaggagaagaacaaagataacaag
aaggagctcattacacaagctaccttgttgtatactatggctgataaaattatcatgtat
gatcagaatcacttgttgggaagagcctgcttttgtctgcttgaaggtgataagatggac
caagctgatgcacaattccactttgtgctcaaccagtctccaaataatattcctgccctt
cttggtaaagcatgcatttctttcaacaagaaagattatagaggagcccttgcctactac
aagaaagcactgcgtaccaatccaggttgcccagctgaggttcgattaggtatgggccac
tgcttcgtgaaattgaacaagttggaaaaagctcnnnnnnnnnnnnnnnnnnnnnnnnnn
nattcaaaatgcgtaggggctttggttggactggctgttctggaactcaataataaagag
gctgattccatcaagaatggtgttcagctcctctctagggcttacacaattgatcccagt
aatccaatggtgttgaatcacttggctaatcacttcttcttcaagaaggactatggtaaa
gtacaacacttggctcttcatgctttccacaatacagaagttgaagcaatgcaggcagag
agttgttatcagctggctaggtcttttcatgtacaggaagattatgatcaagctttccag
tattattaccaggccactcagtttgcctcatcttcttttgtacttccgttttttggattg
ggtcaaatgtacatttatcgaggggacaaagaaaatgcgtcgcaatgttttgaaaaagtt
ttgaaagcctatcctaacaattatgagactatgaaaatccttggatctctttatgcggct
tcagaagaccaggagaaacgggatattgcaaagggacatctaaagaaagtcacagaacaa
tatcctgatgatgtagaggcatggattgagctagcccaaattctagaacagactgatata
cagggtgcactgtcagcctatggtacagctacacgcattctgcaagagaaagtacaggct
gatgtcccaccagagattttgaataatgtgggtgctctgcacttcaggctaggaaaccta
ggagaagcgaagaaatattttttggcatcactggatcgtgcaaaagcagaagctgaacat
gatgagcattattacaatgctatctctgtaacaacgtcctataaccttgccagactgtat
gaggcgatgtgtgaatttcatgaagcggaaaagctgtataaaaacattttaagagaacat
cctaattacgttgattgttacttgcgcttgggagctatggctagggataaaggaaatttt
tatgaggcttctgattggtttaaagaagcacttcagataaatcaggaccatccagatgct
tggtctctgattggcaatcttcatttggctaaacaagagtggggtccaggacaaaagaaa
tttgaaagaatattgaaacagccctccacacaaaatgatacttattccatgctggctctt
ggcaacgtctggctgcagactctacatcagcctacaagagacagagaaaaggagaagcgt
catcaagaccgtgcattagcgatctacaagcaagtactcagaaacgatccaaagaatttg
tatgctgctaatggcataggagctgtcttggcacataaaggatatttccgtgaagctcgt
gatgtttttgcccaagtgagagaggcaacagcagatatcagtgatgtgtggctgaatttg
gcacatatctacgtagaacagaaacagtacatcagtgctgtgcaaatgtatgaaaactgc
ctcagaaagttctataaacatcaaaatactgaagtattgttatatttggcccgggcactc
ttcaaatgtggcaaattacaggaatgcaaacaaactttgttaaaggccagacatgtagcg
ccaagtgatacagtccttatgtttaatgtggctttagtgctacaaagactagctacctct
gtcctgaaagatgaaaaaagcaatctaaaggaggtgcttaacgctgtgaaagaactggag
ctagcccacagatacttcagttacttgagtaaagtgggtgataagatgagatttgacttg
gcacttgctgctactgaagccaggcaatgctctgacttactgagtcaagcccagtatcat
gtggctcgggcacgcaagcaggatgaagaagaaagggagctgcgtgcaaagcaagagcaa
gaaaaggagctgcttcgccaaaagctacttaaagaacaggaagagaagcgcctaagagaa
aaagaagaacagaagaaacttctggaacaaagagctcaatatgtggagaaaaccaagaat
attctgatgttcactggtgaagtagaaggatcaaaggagaaaaaacgtggtggcggtgga
ggcaggcgttccaaaaaaggagcaggggagtttgatgagttcgtcaacgatgacagtgat
gaagatctgcccatatctagaaagaaaaagaagaggaagggcagtggtagtgaacaagat
ggggaagaggaggagggtgagagaaagaagaagaagaggaggagaccccagaaggcagat
gaggggagtgatgatgaagaacatgaaaatggtccaagacctaaaaaacgacgtccaccc
aaagcagagaaaaagaaggctcctaaaccagaacgtctgcctccttcaatgaaaggaaag
atcaaatcaaaagccatcatttcatcaagtgatgattcttctgatgaggataaactcaaa
attgctgatgatggacacgctaggcatagcaacagtgattcggatgatggggaacagcag
cacagtaaacgcattgtttctgatagtgattctgataacagaaacaaatctggtagtgag
gcaggtagtccaaggagatccactgtccgcccatctgaggaagattctgacagtgacagg
tctgctagaaaaaggaggcgatcagattcggagcagtctgacaatgagtctgtacagtcg
gggagaagtcgttccggtggttcagaaaatgaatctcgcccagcttctcgcagtgctgac
tcagacagagattctgagagaggatctgacaacgaaggctctggcagaggatctggtaat
gaaactgaaccagaaggatctaacgatgagggatctgaaggtggttcagatgacagtgat
tag
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integrated database retrieval system
