Antrostomus carolinensis (chuck-will's-widow): 104525407
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Entry
104525407 CDS
T08541
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104525407 (COL5A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104525407 (COL5A2)
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104525407 (COL5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
104525407
NCBI-ProteinID:
XP_028940933
LinkDB
All DBs
Position
Unknown
AA seq
1471 aa
AA seq
DB search
MLYILSPITGEDVEEIACTQNGQMYLNRDIWKPSPCQICVCDNGAILCDEIQCQDALECE
NPQVPPGECCPVCPHTTREFDTTIGRGRKGQKGEPGIVPPVSGIRGRPGPAGPPGSQGPR
GERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGHPTHPGPDGLSRPFSAQMAGLDEKSG
LGSQMGLMPGAVGPVGPRGPQGLQGKQGGAGPAGPPGEPGDPGPMGPIGSRGPEGPPGKP
GEDGEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGES
GPPGAMGATGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAP
GVKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLPGTEGTDGSPGAKGPTGSPGTGGPL
GLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGPIGEEGKR
GPRGDPGSVGPPGPVGERGSPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRP
GEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSS
GDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPP
GPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGASGLQGEKGMAGGHGPDGPK
GSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPI
GPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPPGPDGQPGVKGEP
GEPGQKGDAGSPGPQGLAGSPGPPGPPGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPT
GTPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPSGPPGGPGDKGDAGEDGQPGPDGPP
GPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKQGPTGPPGDKGPPGPIGQSGATGPV
GEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGLPGSPGGPGTPGPVGPPGDAGQRGET
GSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGFTGLQGLPGPPGPIGEQ
GSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPIGPPGVRGSVGEAGPEGPPGDPGPPGPP
GPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAPDDHNKTDPGVHATLKSLSSQIETMR
SPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQGCVEDAIKVYCNMETGETCISANPST
IPRKMWWASRSSDVKPIWYGLDMNRGSQFVYGDTAVTQMTFLRLLSKEASQNITYLCKNS
VGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRYTVLHDSCSKRNGNVGKTVFEYRTQN
VARLPIIDVAPVDIGSTDQEFGVEVGPVCFV
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatattctctctcctatcacaggagaagatgttgaagaaatagcctgcactcag
aatggccagatgtacctgaacagggatatttggaagccttcaccatgccaaatttgtgtc
tgtgacaacggagctattctttgcgatgaaatccagtgtcaagatgcactggagtgtgag
aacccgcaggtgcccccaggagagtgctgtcctgtgtgtccccataccacacgggagttt
gataccaccattggtagaggaagaaagggacaaaaaggagaacctggcatagtgccacct
gtttcaggaatacgaggccgcccaggaccagctggacctccaggctcacaaggaccacga
ggagaacgaggaccaaagggaagacctggtcctcgtggtcctcaagggattgatggtgaa
cctggtatccctggccagcctggtgaccctggtcctccagggcatcccacacacccagga
ccagatggactaagcaggccattttcagctcagatggcaggactggatgagaaatctgga
cttggtagtcagatgggactgatgcctggtgcagtgggtccagtgggtccaagaggtcct
caaggtctccaaggaaaacaaggtggtgctggccctgcagggccacctggtgaacctggg
gatccaggacctatgggtccaattggctctcgtggaccagagggacctccaggaaaacct
ggtgaagatggtgaacctggtagaccaggacaatccggtgagcctggatttccaggatct
ccggggcctcgaggctttcctggtgctcctggtctcccaggtctcaagggtcacagggga
ctgaaaggacttgatggtccaaaaggtgaaattggagcagctggagcaaagggagaatcc
ggaccaccaggtgccatgggtgcaacgggtcctctaggacctagaggaatgccaggagaa
agaggtcgaattggaccacagggtgcccctggtggacgtggccagcatggtatgcctggg
aagccagggccaatgggcccacttggcataacgggttctccaggttttccaggtgctcct
ggtgtaaagggtgaagcaggtccaacaggtcctcgtggtcctgaaggtcctcaaggacaa
agaggtgaaacaggtccacagggcccagctggatcacaaggtcttcctggtaccgaaggg
acagatggttccccaggtgctaagggccctactggatctccaggcacaggaggccccctt
ggtttatcgggtccacctggttccccaggaccacaaggcagtactggtccacctggtatt
cgaggccagccgggagaccctggtgtcccaggtttcaagggagaagcaggacccaaaggc
gaacctggcccacaaggtccccaaggtcccattggccctataggtgaagaagggaaaaga
ggtcctcgaggtgatccagggtcagtaggtccaccaggtcctgttggagagaggggttct
cctggtaaccgtggctttccgggttctgatggcttgcctggaccaaagggtgcccaagga
gagcgtggtccagcaggttcttctggtcctaaaggaggtcagggagatcctgggcgtccc
ggtgagcctggccttccaggagcaaggggtttgacaggaaatccaggtgttcaaggccct
gaaggaaaacttggccccttgggtgctcctggagaagatggacgtccaggtccggcaggt
tcaataggaatcagaggccagccaggcagcatgggccttcctgggccgaagggtagtagt
ggtgatcctggaaaacccggagaagcgggcaatgcaggtgtcccaggacagagaggagcc
cctggaaaagatggtgaagttggtccttctggtcctgttggcccaccaggtctggcagga
gaaagaggagaacaaggccctccaggtcctacagggtttcagggcttgcctgggccacca
ggtcctccaggtgagggaggaaagcctggtgatcagggtgtgcctggagatcctggagct
gttggtccattgggccctaggggagaacgtggcaatccaggggaaaggggagaaccaggt
gcatcaggactccaaggtgaaaagggtatggctggaggtcatggtcctgatggtccaaag
ggaagcccaggtcctagtgggacacctggtgatccaggcccgccgggtcttcaaggtatg
cctggagaaagagggatcgctggaacgcctggccccaagggtgatagaggtggcataggt
gagaaaggtgctgaaggtacagctggcaacgatggggcaagaggtctccctggtccaata
ggcccaatgggtccagcaggtcccactggtgaaaagggtgaaccaggtcctcgaggtcta
gttggtccccctggctctcgtggaaaccctggttctcgaggagaaaatggcccaacgggt
gctgttggttttgctggtcctccgggccctgatggtcagccaggtgtgaaaggtgaacct
ggggaacctggacagaaaggagatgctggatctccagggccacagggtcttgctgggtct
cctggtccaccaggccctccaggtgttcctggtctgaaaggtggtagaggaactcagggt
ccacctggtgctactggattcccaggatctgctggaagagttgggcctccaggacctact
ggaactccagggcctgctgggcctattggtgagccaggaaaagaaggtcccccaggtctt
cgtggtgaccctggttctcatggccgtgtgggagatcgaggtccatctgggcctcctggt
ggtcctggagacaagggtgatgcaggggaagatgggcagccgggcccagatggtccccct
ggtccagcaggaactacgggtcaaagaggtattgttggtatgccaggacagcgaggagaa
agaggcatgccagggctgccaggtcctgcaggtacaccaggaaaacaaggtcccacaggg
ccacctggtgataaaggtcccccaggacctattggccagtcaggtgctactggacctgta
ggtgaagctggtccagaaggacctgctggtaatgacggtactcctggacgagatggagct
gttggagaacgtggtgatcgtggtgaacctggccctgcaggcttaccaggttccccaggg
ggtccaggaactccaggtcctgttggccctccaggagatgcagggcaaagaggtgaaact
ggttctcgaggtcccatgggtcccccaggtcgtgcaggaaaaagaggtttgcctggtccc
caaggacctcgtggtgacaaaggtgacaatggagatcgaggtgacaggggccagaaagga
cacaggggtttcactgggcttcaaggtcttcctggtcctcctggtcctattggtgaacag
gggagtcctggcattccaggcccatttggtcctcggggtcctccaggtccagttggtcct
tctgggaaagatggaagtcctggtccacttgggccaattgggcctcctggtgttagaggg
agtgtaggagaagctggacctgagggtccaccaggtgatcctggccctcctggccctcca
ggacctccaggccatctcactgctgccattggggacattatgggacactatgatgatgct
atggcagatccactaccagagtttactgaagatgaagcagccccagatgaccataataaa
acagacccaggagtccatgccacgctgaagtcactgagcagccagattgagactatgcgc
agcccagatggttcaaagaaacacccagcacggacttgtgatgacctgaagctgtgccac
ccatccaagaagagtggtgaatattggattgatcctaaccagggatgtgttgaagatgct
ataaaagtatattgtaacatggaaactggagagacctgtatttctgcgaacccgtctact
ataccacgtaaaatgtggtgggccagcaggtcatctgatgtaaagcccatttggtatggc
cttgacatgaacagaggatcacagtttgtctatggagatacagctgtcactcagatgaca
ttcctgcgccttctatcaaaggaagcttcccagaatatcacttacctttgtaaaaacagc
gttggatacatggatgaccagactaagaacctgaaaaaagctgtaattctgaaaggggcc
aatgacctggagatcaaagcggagggaaacagccgattcagatacactgttctgcacgac
agctgttctaaacgtaatgggaatgtgggcaagactgtctttgagtacagaacacagaac
gtggcacgcttacctatcatagatgttgcaccggtggacattggcagtactgaccaggaa
tttggagttgaagttgggccagtttgctttgtgtaa
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