Antrostomus carolinensis (chuck-will's-widow): 104525408
Help
Entry
104525408 CDS
T08541
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104525408 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104525408 (COL3A1)
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104525408 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
104525408
NCBI-ProteinID:
XP_010166860
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MGPSGIPGAPGLPGGRGLPGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGA
PGPPGEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGP
SGPAGERGQDGGPGLPGMRGLPGIPGSPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGV
MGFPGPKGNEGAPGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPTGASGERGEPGPSGP
PGLQGLPGGPGPAGENGKPGEPGPKGEIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGG
PGPAGAEGAKGPPGPPGAPGGTGLPGLQGMPGERGASGSPGPKGDKGEPGGKGADGLPGA
RGERGNVGPIGPPGPAGPPGDKGETGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQ
NGEPGGKGERGPPGLRGEAGPPGAAGPQGGPGAPGPPGPQGIKGERGSPGGPGAAGFPGA
RGLPGPPGNNGSPGPPGNAGPAGKDGPPGPPGSAGSPGSPGPAGTRGEPGSPGEKGPPGA
RGERGAPGEPGPQGIVGGRGNTGLPGLRGPSGPPGMAGAKGEDGKPGTNGVPGERGAPGP
QGPIGQRGLPGEPGRDGNPGSDGSPGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGTSGA
PGKAGERGFQGPPGPPGSTGPAGARGPAGPQGPRGDKGETGERGSNGIKGHRGFPGTPGL
PGPPGPLGPQGAIGSPGASGARGPPGPAGPPGKDGTSGYPGPIGPPGPRGNRGESGPAGP
PGQPGLPGPSGPPGPCCGGAAALGAGEKGPVGYGYEYRDEPKENDINLGDIISSMKSINN
QIENIISPDGSRKNPARNCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCL
SANPSTVPKKNWWTSESSGKKHVWFGESINGGFQFSYGDPELPEDVSEVQLAFLRILSSR
ASQNITYHCKNSIAYMDQASGNVKKALKLMSSTESEIKAEGNSKFTYAVLEDGCTKHTGE
WGKTVFEYRTRKTMRLPVVDIAPIDIGGPDQEFGVDIGPVCFL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggaccttctggtattcctggtgctcctggtctgccaggaggccgtggtcttcctggt
cctccaggtacaagtggaaaccctggagcaaaaggcactccgggagaacctggtaagaac
ggtgcaaagggagatccaggcccaaaaggcgagcgtggtgaaaatggcaccccaggtgct
cctggacctcctggtgaggaaggcaaaagaggtgcaaatggtgaacccggacagaatggc
gtacctggtacacctggagaaaggggctcccccggtttccgtggtttacctggtagcaat
ggacttccaggtgaaaagggtcctgcaggtgaacgtggcagcccaggtcctcctggcccc
agcggacctgcaggagagcgtggacaagatggaggcccaggtcttcctggaatgagaggt
ttgcctggaattccaggaagccctggaagcgatgggaaacccggccctccaggtaatcag
ggtgaatctggccgctctggtccacctggccccccaggcccacgtggtcagccaggtgtc
atgggtttccctggtcctaagggcaatgagggtgcaccaggtaagaatggagaaaggggc
cctggtggaccgcctggaacacctggtcctgctggcaaaaatggtgatgttggcctcccg
ggtcctcctggacctactggtgcttctggggagagaggagaaccaggaccatcaggtcca
cctggcctccagggattgcctggtggaccaggaccagctggagagaatggaaagcctgga
gaacctgggccaaaaggtgagattggaggacccggattcccaggccctaagggtgaaaat
ggtatcccaggtgaacgtggtgcacagggtcctccaggacctcctggaacaagaggtggg
ccaggccctgctggcgcagaaggtgccaagggtcctcctggaccccctggtgcccctgga
ggcacagggctgcctggcttacagggaatgccaggagaaagaggcgcttctggaagtcct
ggaccaaaaggcgataagggagaacctggtggcaaaggtgctgatggccttcctggcgca
agaggagagagaggtaatgtaggtcccatcggtcctcctggtcctgccggcccacctgga
gataagggagagactggtccagcaggtgccccaggtccaatgggttcccgtggtggtcct
ggtgaacgaggagaacaaggtcttcctggacctgctggcttccctggagctccaggccaa
aacggggaacctggtgggaaaggagaaagaggcccacctggtctaagaggagaggctgga
ccccctggagctgcaggtccacaaggtggtcctggtgcaccaggtccacctggtccccaa
ggaataaaaggagaacgtggatctcctggaggccctggtgctgctggtttccctggtgct
cgtggtctacctggtccccctggtaacaatggtagcccaggtccccctggtaatgcaggg
cctgcaggcaaggatgggcctcctggaccccctggtagtgctggttctcctggcagtcca
ggacctgctggaacaagaggtgaacccggctcaccaggagaaaaagggccaccaggcgca
cgaggagaaaggggggcaccaggagaaccaggtcctcagggcatcgttggcggccggggt
aacacaggtttgccaggtctgcgtggtccaagcggcccacctggaatggcgggtgccaag
ggtgaagatggtaaaccaggcaccaatggtgtcccaggagaacgtggtgctcccggtcca
caaggtcctattggacaaagaggcttacctggagagcctggcagagatggtaaccctggc
tcagatggctcacctggacgtgatggatccccaggaggcaaaggtgaccgtggtgaaagt
ggctctcctggccctccgggacctcctggtcaccctggacctgcaggtaccagtggtgca
cctggaaaagctggtgaaagaggattccagggtccacctggccctcctggctctactggt
cctgctggtgctcgaggtcctgctggtcctcaaggtcctcgtggtgataaaggtgaaact
ggtgaaagaggcagcaatggcataaagggtcatagaggatttcctggtacccctggtctc
cctggtcctcctggtcccctaggtccacagggcgcaattggaagtccaggagcttcaggt
gcaaggggtcccccaggaccagctgggccacctggaaaagacggtacaagcggctatcca
ggtccaattggtcctcctggcccccgcggtaacagaggtgaaagtggccctgcaggtcca
ccaggccagcctggtcttcctggtccttctggtcctcctggcccatgttgtggtggtgcg
gctgccctgggtgctggcgaaaaaggtccagtgggctatgggtatgaatatcgagatgag
ccaaaagaaaatgatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaac
cagattgaaaacatcattagtcctgacgggtcacggaagaatccagctcgtaactgcaga
gatctgaaattctgccatcctgagctcaagagtggagagtactgggtcgatcctaaccaa
ggctgtaagatggatgctataaaagtatactgtaatatggaaactggcgagacatgcctc
agtgctaaccccagcactgtgccaaagaaaaactggtggaccagcgaaagcagtggaaag
aaacacgtttggtttggagaatctataaatggaggcttccagttcagctatggagaccct
gagcttccagaggacgtctcagaagttcagctggccttcctccgcatcctctccagccgt
gcctcccagaacatcacctaccactgcaagaacagcattgcctacatggatcaagccagt
ggaaatgttaaaaaagctctgaaactgatgagctctacggaaagtgagatcaaggctgaa
ggaaacagcaagttcacgtacgctgttctggaggatggctgtactaaacacactggtgaa
tggggtaaaacagtctttgaatacagaacacgcaagacaatgaggctgcctgtggttgat
attgcacccatagatatcggtggtcctgatcaggaatttggcgtggacattggcccggtc
tgcttcttataa
DBGET
integrated database retrieval system
