Antrostomus carolinensis (chuck-will's-widow): 104525455
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Entry
104525455 CDS
T08541
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04137
Mitophagy - animal
acar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104525455 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104525455 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104525455 (VCP)
03009 Ribosome biogenesis [BR:
acar03009
]
104525455 (VCP)
04131 Membrane trafficking [BR:
acar04131
]
104525455 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104525455 (VCP)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104525455 (VCP)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104525455 (VCP)
Membrane trafficking [BR:
acar04131
]
SNARE
SNARE associated proteins
Others
104525455 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104525455 (VCP)
Exosome [BR:
acar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104525455 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_2
RuvB_N
AAA_16
NPHP3_N
AAA_5
AAA_14
AAA_22
AAA_lid_PRS2_C
ATPase_2
AAA_33
RNA_helicase
ABC_tran
ATPase
DUF815
TIP49
Parvo_NS1
AAA_28
AAA_7
Mg_chelatase
Viral_helicase1
AAA_17
nSTAND3
NACHT
NB-ARC
AAA_18
TsaE
Motif
Other DBs
NCBI-GeneID:
104525455
NCBI-ProteinID:
XP_010166916
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTL
MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA
DDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDD
FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS
KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP
CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDP
AILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEIC
QRACKLAIRESIESEIRRERERQTNPSAMEVEEEDPVPEIRRDHFEEAMRFARRSVSDND
IRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
1610 nt
NT seq
+upstream
nt +downstream
nt
gtcctgagatcatgagcaagctggctggtgagtctgagagcaacctgaggaaagcctttg
aagaagcagagaagaatgctcctgccatcatcttcattgatgaactggatgccattgctc
ctaaaagagagaagacacacggagaggtggaacgtcgcatagtgtctcagctgttgactc
ttatggatgggctgaagcagagagcgcacgtgattgttatggcagctaccaacaggccta
acagcattgacccagcactcaggcgattcggtcgttttgacagagaggtagatatcggta
tcccagatgccaccgggcgcctggagatcctgcagatccacacgaaaaatatgaaactgg
ctgacgatgtggatctggaacaggtggcaaacgagacccatggccatgttggtgctgact
tggctgctctttgctcagaagctgctcttcaggctatcagaaagaagatggatctcatag
acctagaagatgaaaccatcgatgccgaagtgatgaactcgctggctgtgaccatggatg
acttcaggtgggctctgagccagagcaacccttctgctcttcgggagactgtggtggagg
tgccacaagttacctgggaagatattggtggtctagaagatgtaaagagagaactccagg
agcttgtacagtatcctgtggagcacccagacaagttcctcaaatttggcatgaccccat
cgaaaggggttctgttctatgggccacctggttgtggtaagacgctgctggccaaagcca
ttgccaacgaatgccaggcaaacttcatttccatcaaggggccagaattgctcaccatgt
ggtttggggagtctgaagccaacgtgcgtgagatctttgacaaggcccgccaagcagccc
cctgtgtgctcttctttgatgagctggactccatcgcaaaggctcgaggtgggaatatcg
gcgacggcggcggtgctgcagaccgtgtcatcaaccagatcctgacagagatggacggca
tgtccaccaagaagaacgtcttcatcattggtgccaccaacaggccagacatcattgacc
cagccatcctgcgccccggccgcctggatcagctcatctacatccccttgcctgacgaga
agtcccgggttgctattcttaaggccaacctgaggaaatcaccagttgccaaggatgtcg
acctggatttcctagctaagatgaccaatggcttttctggagctgacctgacagaaattt
gccagcgtgcctgtaaactggccatccgtgagtccatcgagagtgagatcaggcgagaac
gtgagaggcagaccaacccttctgccatggaggtggaggaggaggacccagttcctgaga
tacgcagggatcactttgaggaggccatgcgctttgctcgccgctctgtcagcgacaacg
acatcaggaaatacgagatgtttgcacagactctacagcagagccgtggcttcggcagct
tcaggttcccgtcaggtaaccagggcggcgctggtcccagccaaggcacaggaggcggca
gcgggggcaacgtgtacagtgaagacaatgacgatgatctctacggttaa
DBGET
integrated database retrieval system
