Antrostomus carolinensis (chuck-will's-widow): 104525681
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Entry
104525681 CDS
T08541
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04517
IgSF CAM signaling
acar04520
Adherens junction
acar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104525681 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104525681 (AFDN)
04530 Tight junction
104525681 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
104525681
NCBI-ProteinID:
XP_010167201
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDVDEKPLVVQLNWNKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKRREKEALRQASDRDDRLLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVF
QLKRRPPDYVPKKSKKISDGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYY
NYHAYEDGSDSRDKPKLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSIDAETYVEGQRISETTMLQSGMKVQFGSSHVFKFVDPTQDHIIPKRPIDASLMVKG
PRHKTGAVQETTFDLEGDVHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIEQQ
QDYRRQESRSQDTHGPELILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMT
CRYVLSCQYRPDITPTERTHKVIAIVNKMVNMMEGVIQKQKNIAGALAFWMANASELLNF
IKQDRDLSRITVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDD
VLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIIRQ
QLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQAL
LQNYHCAPDEPLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYS
CDVVRNVPSGLQEFLDPLCQRGFCRLIPHSRSPGTWTIYFEGADYESHLSQENAELAQPL
RKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSV
DGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGK
PRPKSEGFELYNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPP
SPGGKNAYASGTTTKITSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDR
MGPAQSQWPNYEEKTQVQAESNHSINTTMQRVARSQEELRDNVFQPERNRLEVVIRKDVE
YIDRKSDSDQWINSSVDSSTSSQEHLNHSSKPVSPGSCLAKSGPGRWKTPATSQPTPVAI
SQPIRTDLPPPPPPPPVHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEH
QRWYEKEKARLEEERERKRREQERKLGQMRSQPLIPAQPVVPPVSLQQVKSEKPSTLQRS
QETVIRELQPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIV
DMLSKEIQDLQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLI
MQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRRQEEE
YYSRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRNTSYL
KTQVLSPDTIYTAKFVAYNDDDEEEEDSNLAGINSYTGSTGAAVGAHEVYRDPRDKRSKS
QDTDLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgagattctactttcaagacaaagcagctggaaattttgcaacaaaatgtatccgtgtc
tctagtactgcgacaacgcaggatgtgatagaaactctggcagagaagtttcgaccagac
atgcgaatgttgtcgtcccctaaatactcgctctacgaggtgcatgtcagcggagaagaa
agaagattagatgtagatgagaagcctcttgttgtacaattgaactggaacaaagatgat
cgagagggaagatttgttctcaagaatgaaaatgatacccttcctccaaagaaggctcag
agtaacggtcctgaaaaacaagaaaaagagggagtaattcagaatttcaaacgaactctc
tcaaaaaaagaaaaaaaagaaaaaaagaggcgtgaaaaagaggcactgcgacaggcatca
gatagagatgacagacttcttcatggggatgatattgagaattctcgccttgcagctgag
gtttacaaagatatgcctgagaccagcttcactcgcacaatatctaatcccgaggtggtt
atgaagcgacggcgacagcaaaaactagagaagagaatgcaggagtttcgcagttctgat
ggcagaccagactcaggtgggacactgagaatttatgcagacagtttaaaaccaaatata
ccgtacaagacaatcctgctgtccaccacggatactgcagactttgcagttattgaagca
ctggaaaaatacggtctggagaaggaaaatcccaaggattattgtattgctcgagtcatg
ctgcctcctggtgctcagcactctgatgataaaggtgctaaagaaactattcttgatgat
gatgaatgtccactgcagatattcagagagtggcctagtgataaaggaatactggtcttt
cagctgaaaaggcgacctcctgattatgtcccaaagaaatccaagaaaatatctgatgga
aagcctttaaaggggaaggaaagagttgacgggtctggctatggctcttgccttccacct
gagaaactaccatacctggtagaattaagcccagggagaaggaatcactttgcctactac
aactatcacgcttacgaagatggttctgactccagagataagccaaagctctatcgtcta
caattaagtgtcactgaagttggaactgaaaaatttgacgacaattccattcagttattt
ggtccaggaatccagcctcatcactgtgacctcactaatatggatggagttgttactgta
accccaagaagcattgatgccgaaacctacgtggaaggtcagcgtatttcagaaacgact
atgctgcagagcggaatgaaggttcagtttgggtcatctcatgtatttaagtttgtggat
cccactcaggaccacattattcctaaaagacctattgatgcaagtcttatggtcaaaggt
ccaaggcataaaactggagctgttcaggaaaccacatttgatctggagggggatgttcac
agtggaacagcattaccagcaagcaagagcaccagcaggctcgatggtgacaggacatcg
tcagcatccagcacagccgaacgaggaatggtgaagccgatgattagaatagaacagcag
caagattaccgcagacaggaaagcagatctcaggatacccatggaccagaactgatacta
cctgccagtattgaattcagggaaagctctgaagatgccttcttgtctgccattataaat
tacacaaatagctcgacagttcattttaagttgtcacctacgtatgttttgtatatgaca
tgtcggtatgtattgtcatgccagtacagacctgacatcactcctactgagcgtactcac
aaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagttatacagaaacag
aagaatattgctggggcacttgccttttggatggcaaatgcatctgaattactgaatttc
ataaagcaagacagagatcttagccgaattactgtggatgcacaggatgttctggcacac
ttggttcaaatggcattcaagtacctggttcattgtctgcaatcagagcttaataactac
atgccagcattccttgatgatccagaggaaaataatcctcagaggcctaaaatagatgat
gtgctgcatacgttgactggagccatgtccctgttgcgacggtgtagagtgaatgctgct
ctgactatacagctcttctcccagctgtttcattttatcaacatgtggctttttaacaga
ttagttacagccccagattcagggttatgttcacattattggggagctattattcgtcaa
cagctgggccatattgaagcctgggcagaaaaacagggtttagaattggctgctgattgc
cacctgagcagaatagtgcaggcaaccacattgcttaccatggacaaatattcacatgca
gatgttccaaatattaacagtacttgctttaagctgaattctctgcagctacaagctttg
ttgcagaattatcactgtgctccagatgaaccactcatcccaacagaattgatagagaat
gtagtaaccgttgcagaaaatacggctgatgaacttgctcgcagcgatggccgggaggtc
caactggaagaggatcctgacttacagctaccttttcttttaccagaagatggctattcc
tgtgatgttgtcagaaatgttccaagtggcttacaagaatttttagatccactctgtcag
agaggtttttgtagactaatacctcattcacggtcaccaggcacgtggacaatatacttt
gaaggtgcagactatgaaagtcacctgtcacaggagaatgctgagctagctcagcctttg
aggaaagaacctgaaattatcactgtaacgctaaaaaaacaaaatggaatgggcctgagt
attgttgctgccaagggtgctggtcaagacaaacttggaatatatgtcaagtctgttgtg
aaaggaggtgctgcagatgtggatggtcgtctggctgcaggggatcagttgctcagtgtg
gatggtcgaagtttggtgggcctgtcccaggaaagggcagcagaacttatgactaggaca
ggttctgtagtaacactagaagtagcaaaacaaggagcaatttaccatggtctggcaacc
ctgcttaatcagccatccccaatgatgcaaagagtttctgaccgccgtggctcaggtaaa
ccccgaccaaagagcgaaggttttgagctgtataataactccactcaaaatgggtcacct
gagagccctcagctgccgtggacggagtacagtgaaccaaagaagctgccaggggatgat
agactaatgaagaacagagctgatcatcgctccagtcccaatgtagcaaatcagcctcca
agccctgggggaaagaatgcttatgcatctggaactaccaccaaaataacctcagtctct
actggaaatctttgtacagaggaacagactctgcccccacgacctgaagcttatcccatc
ccaacacagacctatactagagaatatttcacattcccagcttcaaagtcccaggataga
atgggtccagctcagagtcagtggccaaattatgaagaaaaaacacaggtccaggcagaa
agtaatcattcaatcaatactacaatgcagcgtgtggcacgttcccaggaagaactcaga
gataacgttttccagccagagaggaatcgtttggaagttgttatacggaaggatgtagaa
tacattgatcggaagtcagacagcgatcagtggattaattcatctgtggattctagcaca
tctagccaagaacacctgaaccattcatccaaaccggtctcgcctggttcttgtttagct
aaaagtggacctggccgttggaaaactccagctactagccagccaactccagtggccatt
tcccagcccatcagaacagatcttccccctccaccaccgcctcctccagtgcattatgca
gctgaatttgatgaactacaaatggatttgcctctgcctccccctcctcctccaaatcaa
ataggagcacaagcatcttcccaggtagccgcggctgagcgaaaaaaaagagaagagcat
cagaggtggtatgaaaaggaaaaggcacgtttggaagaagaacgagaaaggaaacgtcgt
gagcaggagaggaaactgggccaaatgcgttctcagccactaattcctgctcagcctgtg
gttccccctgtttcccttcaacaagtgaaatcagaaaaaccttcaactttgcagaggtct
caagaaacagtcattcgagagttacagccccaacagcagcctcggactattgagcggaga
gatctgcagtacattactatcagcaaggaagaactgtcctctagtgatagcctctctcca
gatccctggaaacgggatgctaaggagaaactggagaagcagcaacagatgcacattgtg
gacatgctgagtaaagagattcaggaccttcagaacaagcctgatcgtactgccgaagaa
aatgaccgcctacgcaaactcatgcttgagtggcagttccaaaagcgacttcaggaatca
aagcagaaggatgaagatgatgatgaagaggaggatgatgatgtggatactatgctcatc
atgcagcgactggaggcagaaagaagagcaagggacgaagaacgcagacggcagcagcag
ttggaagaaatgcgcaaacgagaagcagaagacagggccaggcaggaagaagagcgacga
cagcaagaggaggagcggaccagaagagaggctgaagaaaagaggcggcaggaagaggag
tattacagtcgcttagaggctgaaaggcgcaggcagcacgatgaagcagaacgaagatta
ctggaacctgacgagcctggtctgtacagacctccgcttccacgggaatatgaactccca
tccccaaccccttcatctaacgctcctcctcccccacctcagcgaaacacctcttacctc
aaaacacaggtcctctcccctgacacgatttatactgccaagtttgttgcatacaatgat
gatgatgaggaggaggaggattccaatctagcaggaataaattcttacactggatctaca
ggagcagctgttggggcccatgaagtttatcgggatccaagagacaaaagatctaaaagt
caagatacagatttacctggagcaccagaaaacttgacgttcagggaacgccaacgactt
ttttcacagggtcaggatgtatccaataaagtaaaagcttctaggaaattaatggaactg
gaaaatgagttgaatacaaaataa
DBGET
integrated database retrieval system
