Antrostomus carolinensis (chuck-will's-widow): 104525778
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Entry
104525778 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104525778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104525778
Transporters [BR:
acar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104525778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
RsgA_GTPase
AAA_23
R1_ABCA1
AAA_30
AAA_22
AAA_15
Motif
Other DBs
NCBI-GeneID:
104525778
NCBI-ProteinID:
XP_010167330
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
QGFASERDFEEYIKSDNRSGSVLAAVVFKHRFHQSTAPLPLQVNYELRFKYSPRNAPRSE
QTGLNPNLDRDWHTXXXXXXPREAKFADGGTPGYIREGFLAVQHAVDRAIMQHHANASST
SLLDNITVVVQRFPYPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKE
YMHMMGLSNWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTNSDPTLVFTFLAI
FSISSISFNFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISN
VAMAMGAQLIGMFEGKGTGIQWRDLMKPVSVDDNFTLAQVLGMLLLDSVLYGVVAWYVEA
VFPGEYGVPQPWYFFLMPSYWCTRPRTVVGKEKEEEEDPEKALKSQYIEEEPADLVSGIK
IKHLSKVFKVGNKMKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLTGLHSPTGGQAY
INGYEISQDMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSKCPEEINHILRI
LNLEDKRRSLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQR
SNRTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLG
EISRLICHYVPNATMESNAGAELSFILPKESTHRFEALFTELEQRREELGIASYGASVTT
MEEVFLRVGKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALIT
EDCSSIKLNTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLVFTAFALIVAKTFPG
PRDSSLLRLTLEPYGQTIVPFSVSAASGLSQRLAEQYVELLDAQRQSPLEVLGGLEEYLI
SRASEEGGAFNEHYIAAASFEGAGNRTVVTALFNNQAYHSPATTLMLADNAVFRVLAGPN
VSITVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKH
VQFVSGVYVVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHLVDVMLIFLLYG
WAIIPLMYLLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSKTLDKVF
LILPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQMNYFSWETPGIGRYLTS
LTVQGFSFLFLLFLIETNLLWRLRTLVCGICRRRKWVALLNRVSALPEDRDVADERKKVL
ESPPELLSSLSSPLVIKELTKVYDSQESLLAVDRISLAVSKGECFGLLGFNGAGKTTTFK
MLTGDESITSGDAFVDGHSILANIKK
NT seq
4040 nt
NT seq
+upstream
nt +downstream
nt
ctcagggctttgcctcggagcgggactttgaggagtacatcaagtcagacaaccgctcgg
gcagcgtgctggccgccgtcgtgttcaagcaccgcttccaccagagcacggccccgttgc
ccctccaggtcaactatgagcttcgcttcaagtacagcccaaggaacgctccgcggagcg
agcagacgggtctgaaccccaacctggaccgggactggcacaccnnannnnnnnnnnnnn
nnccccgagaggccaagtttgctgatggagggacaccaggttacatccgagaaggtttcc
tggcggtgcagcacgcggtggacagagccatcatgcagcaccacgccaacgccagctcca
ccagcctgctggataacatcacggtggtggtgcagcgcttcccctacccggcctacgtca
atgacctcttcctcctcgccatccagaaccagctgcccctgctgctcatgctcagcttca
cctacacctcgctcaacattgtccgtgccgtcgtgcatgagaaggagaagaagctgaagg
agtacatgcacatgatgggcctcagcaactggttgcactggagtgcctggttcctcatgt
tcttcctcttcctcctggtgtcggtgtttttcgtcaccgtgctcttctgtgtcaaggtga
gcgaacagggagcagtgctcaccaatagtgaccccacgctggtgttcaccttcctcgcca
tcttctccatctcctccatctccttcaacttcatggtgagcaccttcttctcgagagcaa
acgtcgcggctgctgctggcggcttcctctactttttctcctacatcccttatttcttca
tctcaccccgctacgacctgatgtcccacagccagaagctggcatcctgcctcatctcca
acgtggccatggccatgggggcacagcttattggcatgttcgaaggaaaagggactggca
tccagtggagggacctcatgaagccagtcagtgtggacgacaactttaccttggcccaag
tgctggggatgctgctcctggactcggtgctctacggcgtggtggcctggtacgtggagg
ccgtctttcccggggagtacggcgtccctcagccctggtacttcttcttgatgccctcgt
actggtgcacgcgccccaggactgtcgtgggaaaagagaaggaggaggaggaggaccccg
agaaagccctgaagagccagtacattgaggaagaacctgctgaccttgtgtcaggaatca
aaataaagcacctttccaaggtcttcaaagtgggaaacaagatgaaagaggcagtcaagg
acctaacggtgaacatgtatgaagggcagatcaccgtcctgttgggacacaacggtgctg
ggaagaccaccactctgtccatgctcacaggnctgcactctcccacgggcgggcaggcgt
acatcaacggctacgagatctcccaggacatggtcctgatccgccgcagcctggggctgt
gtccccagcacgacgtcctcttcgacaacatgacagtggaagaacacctccacttctacg
cagggctgaaggggtacccaccctccaagtgccccgaggagatcaaccacatcttgagga
tcctcaacctggaggacaagcgccgctcgctgaccaaggcgctctccggcggcatgaagc
gcaagctctccattggcattgccctcattggggactccaaggtggtgatgctggatgagc
cgacgtcagggatggacccagcctctcgcagggccacgtgggacctcctgcagcagcaga
ggagcaaccgcaccatcctgctgaccacccacttcatggacgaggctgacctgctggggg
accgcatagctatcatggccaagggcgagctgcagtgctgtggctcctcgctcttcctca
agcgtaaatacggggcaggatatcacatggtgatggtgaaggaaccctactgcaacctgg
gagagatctcccgcctcatctgtcactacgtgcccaacgccaccatggagagcaatgccg
gggcagagctgtccttcatcctgcccaaggagagcacgcacaggtttgaggccctgttca
ccgagctggagcagaggcgggaggagctgggcatcgccagctacggcgcatccgtcacca
ccatggaggaggtcttcctgagggttgggaagctggtggactccagcatggatatccagg
ccatccagctgcctgctctccagtaccagcatgagagacgctccaatgactgggccatgg
atgactccagcagcctgagtggcatgacagatatgactgatgacagcggggcgctcatta
ccgaggactgctccagcatcaagctcaacaccgggttctacctgtgctgccagcagttct
acgccatgttcatgaagcgagccatgtacagctggcgcaactggaagatggtggcagcac
agttcctcgtgcctctggtcttcactgcctttgccctcatcgtggccaagaccttcccag
gacccagggactcctccctgctgaggctgacgctggagccctacggccagaccattgtgc
ctttctccgtctcggctgcctcgggtctgtcgcagaggttggcagagcagtacgtggagc
tgctggacgcccagcgccagtcaccgctggaggtgttgggtggcctggaggagtacctca
tctcaagagcctccgaggaagggggagccttcaacgagcactacatcgcagctgcctcct
tcgaaggagccgggaaccgcacggtggtcaccgcactcttcaacaaccaggcatatcact
cccctgccacaacccttatgctggctgacaacgctgtcttcagggtcctggcgggcccca
acgtctccatcacagtcaccaactaccctcagccccgcaacatcaccgagaaggccaaag
accagctcatggaaggccagacggggtttgccattgccatcaacctgctgtatggcatgg
cctcgcttgccagcaccttcgctctgctgctggtcagcgagcgggccatcaaagccaagc
acgtccagtttgtcagcggcgtctatgtggtcaacttctggctttctgccctgctctggg
acatcatcaacttcctcatcccttgtgctctgatgctggtgatattccaagcctttgatg
tgcaagccttcacccaagacagccacctcgttgatgtgatgctgatcttcctcctttatg
gctgggccatcatccccctcatgtacctcctcagcttcttcttctcagtggcagccacag
cctacacccgtctcaccatcttcaacatcctctcgggcacagccaccttccttgcggtca
ccatcatgagcatcccagagctgggcttggtggacctctccaaaaccctggataaagtct
ttctcatcttacccaattactgcttgggccagtgcatcagtgacttctaccagaactatg
agttcattcagttttgtacctcctccgttgaagccatcttcatctgcaaggccttcaata
tcagttatcagatgaactacttttcctgggagacgcctgggattggacgatacctgacat
ctttgaccgtccagggcttctccttccttttcctccttttcctcattgagacaaaccttc
tctggagactgagaactttggtctgtggcatctgcaggcggcggaagtgggtggcactgc
tgaacagggtgtctgcactgccagaggaccgggacgtggcagatgagaggaagaaggttt
tggagtcaccaccagagctgctatcatctctcagcagccctctggtcatcaaggagctca
ccaaggtctacgacagccaggagtccttgctggcagtggacaggatctccttggcggtca
gcaaaggggaatgctttggccttcttggcttcaatggagcaggaaaaaccaccaccttca
agatgctgactggtgacgagagcatcacatcaggggacgcctttgtggatggccacagca
ttctggccaacatcaagaag
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