Antrostomus carolinensis (chuck-will's-widow): 104525887
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Entry
104525887 CDS
T08541
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104525887 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acar03000
]
104525887 (ARID1A)
03021 Transcription machinery [BR:
acar03021
]
104525887 (ARID1A)
03036 Chromosome and associated proteins [BR:
acar03036
]
104525887 (ARID1A)
Transcription factors [BR:
acar03000
]
Eukaryotic type
Helix-turn-helix
ARID
104525887 (ARID1A)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104525887 (ARID1A)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104525887 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104525887
NCBI-ProteinID:
XP_010167467
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQPPSQTPHSQPSYQQQ
QQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQTTAQQHQQSQPPYSQQQSQSPYQ
QQQQTQQTASSALSQQSSSYPQSQPPQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMAS
SKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSM
NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGG
QYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYSGLPPGRMSHA
TMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQ
GGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMTNNSAGMAASPEMMGLGDVKLTPATK
MNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTN
LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDL
KPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMM
GRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSY
GGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQRHDSYGNQFST
QGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQQLP
PAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVSAPPGSN
TQQNMPPQMMGGPIQSTAEGPQQGAMWQGRNEMGYSYPNRQSSGSAPQGPAYHGVTRTDE
ILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPL
PRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQP
VLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPG
LLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEDDEPRSLN
CEEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQ
EFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCNSVLRKRSAAESNPSTREGET
LPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESSKFPFGISPAQSHRNIKI
LEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKL
ILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLS
PYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDL
ILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGN
LLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFTLY
ESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccatatggaggaaacaacccatacacacaa
caacagggacctcaggcggggccacagcaaggacatggctatccaggacagccctacggg
ccacaaactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcatatgcacagcagattcctccttacggacagcagggccccagtgcatatggg
cagcaaagccagactccatactacaaccagcaaagccctcatccccaacagcagcagcct
ccatattctcagcagcctccatcccagacccctcactctcagccttcgtatcagcagcag
caacagcctcagtctcaacctccacaacttcagacatcgcagcctgcatattctcagcag
cagtcccagccgccccatcagcaatcccccactccatatcctcaacaacagaccacagcc
cagcagcatcaacagagtcagcctccctactcacagcagcagtcacagtcaccctaccag
cagcagcaacaaactcagcagacagcttcctcagctctttctcagcagtcatcttcatac
cctcagtcacagccgccgcagcaacagtctgcctactcccagcaacgcttcccccctcct
caggagttatctcaagactcatttgggtcccaggcatcatctgctccctcaatggcttcc
agtaaagggcaagaagatatgaacttgaatcttcagtccagaccttctagcctgccggac
ctgtctggttcaatagatgatctacccatgggtacagaaggagccctgagtcctggagta
agcacatcagggatttccagcagccaaggagagcagagtaacccagctcagtctcctttc
tctccacatacctctcctcacctgccaggcatcagaggaccctccccatccccagttgga
tctccagctagtgttgctcagtcccgctctggtccactttcacctgctgcagtaccaggc
aatcagatgccaccccgaccgccgagcggccagtcggacagtatcatgcatccttccatg
aaccagtcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccag
tacagctcgccccagcccggctcagccttatctccccgtcagtcttctggaggacagatg
cacgctggcatggggccgtaccagcagaactccatgggaagctacggaccccagggcggg
cagtacggacctcaaggaggttatcccaggcagccaaactacaatgctatgtcaaatgcc
aactatcccagtccaggaatgggaggaagcatgaaccccatgggagcagggagccagatg
cacgggcagactggtgtgccaccatacagtgggcttcctccagggaggatgagccatgcc
accatggggaacagaccttatggacctaacatggcgaatatgccacctcaggtggggaca
gggatgtgccccccaccagctggcatgaatcgcaaagcacaagaagcggctgctgccgcc
atgcatgctgctgccaactccatccagaacaggcctcctggttaccccaacatgaaccaa
ggaggaatgatgggcactggacctccttatggacagggaattaacagtatggctggcatg
ataaacccccagggcccaccctatcccatgggtggaaacatgactaacaactctgcaggg
atggcagcaagccccgaaatgatgggtcttggggatgtcaaattaacacctgcaactaaa
atgaacaacaaggcagatgggacgccaaaagcagaatccaagtcaaagaagtccagttcc
tctactacaaccaatgagaagatcaccaaactgtatgagctgggtggtgagcctgagagg
aagatctgggtagatcgttacctggcctttactgaagagaaggccatgggcatgacaaat
ctcccagcagtaggcaggaaacccttggacctttaccggctctacatctcagtgaaggag
attggaggattgactcaggtcaacaaaaacaagaaatggcgcgagttagccacaaatctc
aatgtgggcacgtccagcagtgcagctagctctttgaagaagcagtacatccagtgtctc
tatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgctgct
gctgattcaaagaagtctcagactaagatacagcctccgtctccagcgggttcaggctca
atgcagggtcctcagacacctcagtccaccagcagctccatggcagaaggaggagacctg
aagccaccaactccagcatctacgccacacagtcagatgccccctttgcctggcatcagg
agtaactcagtgggccttcaggatgcctttgcagatggtagtgatcctacgttccagaag
cggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatgatg
ggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccagga
agcgatcccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaat
cgtgctgcaggtccagggatgggtaatatggccatgggacagcggcaacactattcctat
ggaggtccttacgacagagtgaggacggagcccggcatgggacctgagggcaacttagca
accggaactccgcagccaaacatcatgccttccacccctgaatcggggatgtactctccc
agccgctacccacagcagcagcagcaaagacatgattcctatggcaatcaattctccact
caaggcacatcctcgggcagccccttccctagccagcaaactaccatgtatcaacagcaa
cagcagaattacaagcgaccgatggatggcagctacggcccgcctgctaaacgacacgaa
ggggagatgtacaacgtaccgtacagcgccgggcaggggcagacacagcagcagctgcct
ccagcacagacccagcaaccgagccagcagcaaactgcacagccatctccacagcaggac
ctgtataaccagtatgggagtacataccctgctgctgatcgccgatctgccggagggcca
cagaaccagttcccattccaatttggcagagacagggtctcggctcccccaggctccaat
actcaacaaaacatgcctcctcagatgatgggtggtcccatacagtctactgcagagggt
cctcagcaaggcgccatgtggcaggggcgtaacgaaatggggtacagctatccgaaccgg
cagagcagcggctctgcgccccaggggcctgcttatcacggagtgactcgaacagatgaa
attctgcattcagaccagagggtcaaccatgagggaccatggccttcccacgggaaccgg
caacctccttatggtccctctgcccccgtgcccccaatgactaggcctccccagtctaac
taccagaccccccctagcatgcagaatcacattcctcaggtatccagcccagcacctctg
cccagacctctggagaatcgtacttctcctagtaaatctccattcctgcactcggggatg
aaaatgcagaaggcaggaccgccagtccctgcctcgcatataacaccagcagctgtacag
cctcccatgatccgacgagacatcaccttccctccgggatcagtagaagctacgcaacct
gtgttgaagcagaggagacggctgacagcaaaagatattggaactcctgaagcctggaga
gtgatgatgtctctgaagtccgggctgctagctgaaagtacgtgggccttagataccata
aacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctgccaggt
ttgctggagctcttggtggagtatttccggcgctgcctgatcgagatctttggaatcctg
aaggaatacgaggtgggagacccagggcaaagaacactattagatcctgaaaggttctgc
aaatcttcagcttcctctcatgaagaaggggaggaggatgatgaaccacggagcctaaac
tgtgaggaggaagaagaggatgaggaagaggaggaggctgcgttttcaagcaaggacaaa
gcacctctagagagcagcgaggaaaaactagttagtaaatttgacaaacttccagtcaag
gtcgtgcagaagaatgacccgtttgtggtagattattcagacaagttggggcgagtgcag
gagtttgagagcgggctgctgcactggcggatcggtggcggagataccaccgagcacatt
cagacccactttgagagcaagacggagctacctttgactcataaacgagcttcctgcaac
tctgtcttgaggaaacgttcagcagctgagagcaatccaagcactagggaaggagagact
cttccatccgacagctcctcggagaagaggataactgccaccatggatgacatgctttcg
gcacgtccgggctccctggcaggggaggaggaagaggtcaaagctttggaaacggcgaag
gaaagcagcaagtttccctttggcattagtccagctcagagccacagaaatataaaaatt
ctggaggatgaacctcacagtaaagacgagacgcccctctgcaccctcctagactggcag
gactctctggcgaagcgatgcatctgtgtctctaacatcatcaggagtttatcatttgtg
ccgggcaatgactttgaaatgtctaaacatcccgggctgctgctgattctagggaaactg
atcctcttacaccacaagcatccagaacgcaaacaggcacccctgacctatgagaaagag
gaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgcttggag
atgctgcgtgaaaatacactggtcacgttggccaacatttctggccagctggacctctcc
ccttacccggaaagcatctgtttgcctatcctggatggactcctccactgggcagtatgt
ccatcagcagaggcccaggatccctttccgacactgggacccaatgcagtcctctcccct
cagagactggttttggaaacactcagcaaactcagcatccaggacaacaatgtggatttg
attcttgcaactccccctttcagtcgcttggagaagctgtacagcaccatggtgcggttc
cttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactgctggccaacttg
gcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcattggcaac
ttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccaggctggc
ttgatgcacatgcagaacccaccctttgagtcgacgagcgtggacatgatgcgccgagct
gctcgggcgctgctcgccctggccaaggtggacgagaaccactcagagttcacgttatac
gagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttcacaagtt
atttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
