Antrostomus carolinensis (chuck-will's-widow): 104526487
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Entry
104526487 CDS
T08541
Symbol
DDX17
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104526487 (DDX17)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104526487 (DDX17)
Spliceosome [BR:
acar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104526487 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104526487
NCBI-ProteinID:
XP_028941277
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
FGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKK
EITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQ
TGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST
CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE
PQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDV
CMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE
RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKG
TAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGGRSRYRTSSSVNN
PNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGSAYGSPNSAFGAAQSQ
YGYTQGSYGAAAYGTSGYGTAEDRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1927 nt
NT seq
+upstream
nt +downstream
nt
gtttggagcaagtcgtggaggtcctcttcctccaaagaaatttggtaatccgggggaacg
tttacgtaagaaaaaatgggatttaaacgaactgcccaagtttgagaagaatttttacgt
ggaacatccggaagtggccaggcttactccatatgaagttgaagaattgcgaagaaagaa
agagataacaattcgaggaatggagggctgccccaagcctgtgtttgccttccaccagtg
tagctttccacagtatgtgatggatgccctgatggaccagaacttcacagaacccactcc
aattcagtgccaaggctttccactagcccttagtggtcgcgatatggtgggcattgcgca
gaccggctctgggaagacactagcatacttgttgcctgcaattgttcacatcaaccacca
gccatatttggagagaggggatggcccaatttgcctggttctagcacctactagggagtt
ggcccagcaagtgcagcaggtggctgatgattatggcaaatgttcaagactgaagagtac
ctgcatatatggaggagcacccaaaggtccccaaatcagagatctagaaagaggtgtgga
gatctgcattgctacaccaggtcgcttgattgacttccttgaggcaggaaagaccaacct
tcgtcgttgtacatatctcgtgctggatgaagcagacaggatgttggacatgggatttga
accccaaattcgtaaaattgttgaccagataaggcctgacagacagaccctgatgtggag
tgccacctggccaaaagaagtgcgccagcttgccgaggacttcctgcaggactatgttca
gatcaatgtgggaaacttggagttgagtgccaaccacaacatcctgcagattgtggatgt
atgcatggaaagcgagaaagaccataagctgatacaactgatggaagaaatcatggcaga
gaaggaaaacaaaactatcatctttgtggagacaaagaggcgatgcgatgatctcactcg
aaggatgcgcagagatggttggccagctatgtgtatccatggagacaagagtcagccaga
aagagactgggtgcttaatgagtttcgttctggaaaggctcctatcctcattgctaccga
cgttgcatctcgtgggctagatgtggaagatgttaaatttgtgataaactacgactatcc
gaacagctctgaagattacgtgcaccgtattggccgtaccgcacgtagtaccaacaaagg
taccgcctacaccttcttcacaccaggaaacctgaaacaagccagggagcttatcaaagt
gttggaagaagccaatcaagccatcaatccaaaactgatgcagcttgtggaccacagagg
aggaggaggtggtggtggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaa
ccctaacctgatgtaccaggaagagtgtgacaggaggctccggggagtgaaagagggccg
gagagactcgggtggcttcagagaccgtgagcgtggtgacagttatgccaacggagccaa
caagacctatggcagtgcctacgggagccccaattctgcttttggggcagcgcagagcca
gtatggttacactcaagggagctatggagcagctgcctatggcacgagtggctatggcac
cgccgaggacaggggtagggggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccactaacgtgatgggcta
tatgggacagactgccacctaccagtatccaccccctcccccgccccctcccccctcacg
caaataa
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